RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 RFPL4BQ6ZWI9 263 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 OVCH1Q7RTY7 1134 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 KANSL1Q7Z3B3 1105 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 DGLUCYQ7Z3D6 616 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 PAQR8Q8TEZ7 354 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 CNTNAP3BQ96NU0 1288 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 NECAB3Q96P71 396 aaPredicted RBP11.29□□□□□ -0.6
COLCA1-201ENST00000355430 TMEM82A0PJX8 343 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 CD1CP29017 333 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 CRABP1P29762 137 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 IL13RA1P78552 427 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 ALKBH1Q13686 389 aaKnown RBP11.29□□□□□ -0.6
COLCA1-201ENST00000355430 OR1N1Q8NGS0 311 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 ARL11Q969Q4 196 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 LRRC61Q9BV99 259 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 PTPRZ1P23471 2315 aaPredicted RBP11.29□□□□□ -0.6
COLCA1-201ENST00000355430 PARP14Q460N5 1801 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 A0A0A6YYD5 115 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 MPIG6BO95866 241 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 BDH1Q02338 343 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 IDO2Q6ZQW0 420 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 DPY19L4Q7Z388 723 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 AUNIPQ9H7T9 357 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 PRAMEF4O60810 478 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 DNAJB6O75190 326 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 NID1P14543 1247 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 RAD52P43351 418 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 CSNK1A1P48729 337 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 PCBP3P57721 371 aaKnown RBP11.29□□□□□ -0.6
COLCA1-201ENST00000355430 GLO1Q04760 184 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 PXDC1Q5TGL8 231 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 PRAMEF9Q5VWM5 478 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 FAAP20Q6NZ36 180 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF704Q6ZNC4 412 aaPredicted RBP11.29□□□□□ -0.6
COLCA1-201ENST00000355430 AMER3Q8N944 861 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 SPTSSAQ969W0 71 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 GABRG3Q99928 467 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 RGCCQ9H4X1 137 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 PLEKHB1Q9UF11 243 aaPredicted RBP11.29□□□□□ -0.6
COLCA1-201ENST00000355430 SLC23A1Q9UHI7 598 aa11.29□□□□□ -0.6
COLCA1-201ENST00000355430 TMEM212A6NML5 194 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF593O00488 134 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 HIST1H1CP16403 213 aaKnown RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 S100A11P31949 105 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 C21orf58P58505 322 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 OR7A5Q15622 319 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 PRAMEF20Q5VT98 475 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF454Q8N9F8 522 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 DNAAF1Q8NEP3 725 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 LOXL4Q96JB6 756 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 LCORQ96JN0 433 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 PRRT1Q99946 306 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 EIF5A2Q9GZV4 153 aaKnown RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 HSPA12AO43301 675 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 GFRA3O60609 400 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 OLFM2O95897 454 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 HERV-K104P61576 105 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 DBPQ10586 325 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 SLC2A12Q8TD20 617 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 MVB12AQ96EY5 273 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 LINC00615Q96LM1 132 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 SLC38A1Q9H2H9 487 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 NUDT21O43809 227 aaKnown RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF14P17017 642 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 GLP1RP43220 463 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 KCNAB1Q14722 419 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 MEF2DQ14814 521 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF680Q8NEM1 530 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 TEX101Q9BY14 249 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 BARHL1Q9BZE3 327 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 OR10A5Q9H207 317 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF160Q9HCG1 818 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 MOKQ9UQ07 419 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 GPR55Q9Y2T6 319 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 CRTAPO75718 401 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 THBS1P07996 1170 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 ADH6P28332 368 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 DUSP8Q13202 625 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 EXOSC2Q13868 293 aaKnown RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 MLC1Q15049 377 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF585AQ6P3V2 769 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 TMUB2Q71RG4 321 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 CMTM4Q8IZR5 234 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 CSNK2A3Q8NEV1 391 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 OR51D1Q8NGF3 324 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 NPRL2Q8WTW4 380 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 ORAI1Q96D31 301 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 FAM71F1Q96KD3 344 aaPredicted RBP11.28□□□□□ -0.6
COLCA1-201ENST00000355430 STEAP1Q9UHE8 339 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 HHLA2Q9UM44 414 aa11.28□□□□□ -0.6
COLCA1-201ENST00000355430 BORCS7-ASMTA0A0B4J1R7 106 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 A0A1B0GV50 99 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 GABARAPH6UMI1 98 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 FFAR1O14842 300 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 LALBAP00709 142 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 KNG1P01042 644 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 SLC35E2P0CK97 266 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 ZNF616Q08AN1 781 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms