RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 B3GNTL1Q67FW5 361 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 ZNF776Q68DI1 518 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 FBXO42Q6P3S6 717 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 GLDNQ6ZMI3 551 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 ZAR1Q86SH2 424 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 RANBP3LQ86VV4 465 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 GJD3Q8N144 294 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 GTPBP8Q8N3Z3 284 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 STOML3Q8TAV4 291 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 TMEM239Q8WW34 195 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 DNAJA3Q96EY1 480 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 OR2M4Q96R27 311 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 GGACTQ9BVM4 153 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 SLC25A32Q9H2D1 315 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 MRPS18AQ9NVS2 196 aaKnown RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 GDE1Q9NZC3 331 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 KCNE5Q9UJ90 142 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 SLC17A4Q9Y2C5 497 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 A0A1B0GTQ1 180 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 GXYLT2A0PJZ3 443 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 BTBD17A6NE02 478 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 SC5DO75845 299 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 PPP1R3DO95685 299 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 FCARP24071 287 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 GABRA3P34903 492 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 AQP2P41181 271 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 PPM1FP49593 454 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 OR12D2P58182 307 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 KLF9Q13886 244 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 ELAVL1Q15717 326 aaKnown RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 DEFB110Q30KQ9 67 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 NDUFAF6Q330K2 333 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 GXYLT1Q4G148 440 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 FAM76BQ5HYJ3 339 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 EXOSC6Q5RKV6 272 aaKnown RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 C3orf33Q6P1S2 294 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 TMEM52Q8NDY8 209 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 DNAAF1Q8NEP3 725 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 C17orf47Q8NEP4 570 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 C1QTNF2Q9BXJ5 285 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 PIGMQ9H3S5 423 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 A0A1B0GUH1 482 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 TRAPPC13A5PLN9 417 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 B3GALT2O43825 422 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 FGF17O60258 216 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 PRKNO60260 465 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 ADH1BP00325 375 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 UBBP0CG47 229 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 UBCP0CG48 685 aaKnown RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 VSIG10L2P0DP72 767 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 NAA10P41227 235 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 PPIAP62937 165 aaKnown RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 FZD5Q13467 585 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 CRMP1Q14194 572 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 DCST2Q5T1A1 773 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 PRPF38BQ5VTL8 546 aaKnown RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 CD200R1LQ6Q8B3 271 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 PARM1Q6UWI2 310 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 TMEM184AQ6ZMB5 413 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 MRGPREQ86SM8 312 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 NAXDQ8IW45 347 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 FOXRED2Q8IWF2 684 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 SEMA6DQ8NFY4 1073 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 FGF14Q92915 247 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 DVL3Q92997 716 aaPredicted RBP8.56□□□□□ -1.04
SMG6-202ENST00000354901 GAL3ST3Q96A11 431 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 C4orf36Q96KX1 117 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 ZNF649Q9BS31 505 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 ISYNA1Q9NPH2 558 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 RASL12Q9NYN1 266 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 NPTNQ9Y639 398 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 DOCK8Q8NF50 2099 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 STX11O75558 287 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 KRT33AO76009 404 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 ZNF44P15621 663 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 S100A2P29034 98 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 TLX1P31314 330 aaPredicted RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 DLSTP36957 453 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 EPHA4P54764 986 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 ADPRHP54922 357 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 F2RL1P55085 397 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 ALG11Q2TAA5 492 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 ACSM3Q53FZ2 586 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 NIPAL3Q6P499 406 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 TMEM200AQ86VY9 491 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 RFLNBQ8N5W9 214 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 CAMKVQ8NCB2 501 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 CCDC54Q8NEL0 328 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 OR5W2Q8NH69 310 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 TMED6Q8WW62 240 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 SMPDL3BQ92485 455 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 RGP1Q92546 391 aaPredicted RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 BPIFA2Q96DR5 249 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 HS6ST2Q96MM7 605 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 PRSS27Q9BQR3 290 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 EXO5Q9H790 373 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 CLDND1Q9NY35 253 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 COMMD9Q9P000 198 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 DNAJB11Q9UBS4 358 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 PISDQ9UG56 409 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms