RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 EI24O14681 340 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 SLC2A10O95528 541 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 NOS3P29474 1203 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 PCYT1AP49585 367 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 CD47Q08722 323 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 DBPQ10586 325 aaPredicted RBP19.47■□□□□ 0.71
SHMT1-203ENST00000354098 SP5Q6BEB4 398 aaPredicted RBP19.47■□□□□ 0.71
SHMT1-203ENST00000354098 PARP8Q8N3A8 854 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 LINC01560Q8TB33 94 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 S100PBPQ96BU1 408 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 SLC29A1Q99808 456 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 RBM4BQ9BQ04 359 aaKnown RBP19.47■□□□□ 0.71
SHMT1-203ENST00000354098 RBM4Q9BWF3 364 aaKnown RBP19.47■□□□□ 0.71
SHMT1-203ENST00000354098 HDHD5Q9BXW7 423 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 ACTR6Q9GZN1 396 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 ICE1Q9Y2F5 2266 aa19.47■□□□□ 0.71
SHMT1-203ENST00000354098 CIB4A0PJX0 185 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 CENPBD1B2RD01 187 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 H0YHG0 523 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 IL32P24001 234 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 IGFBP5P24593 272 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 ARF1P84077 181 aaKnown RBP19.46■□□□□ 0.71
SHMT1-203ENST00000354098 SORDQ00796 357 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 GABRA6Q16445 453 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 TMEM236Q5W0B7 351 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 LNX2Q8N448 690 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 OR2T33Q8NG76 320 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 WFIKKN1Q96NZ8 548 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 NMNAT3Q96T66 252 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 ALG12Q9BV10 488 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 DCLRE1BQ9H816 532 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 NKX1-2Q9UD57 310 aaPredicted RBP19.46■□□□□ 0.71
SHMT1-203ENST00000354098 PLEKHB1Q9UF11 243 aaPredicted RBP19.46■□□□□ 0.71
SHMT1-203ENST00000354098 SLC22A23A1A5C7 686 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 PRSS37A4D1T9 235 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 IDH3BO43837 385 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 SEC14L2O76054 403 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 ALPLP05186 524 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 EPHA2P29317 976 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 GIPRP48546 466 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 CRISP1P54107 249 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 DAG1Q14118 895 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 GINS1Q14691 196 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 ZNF362Q5T0B9 420 aaPredicted RBP19.46■□□□□ 0.71
SHMT1-203ENST00000354098 ACSM5Q6NUN0 579 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 DMRTC2Q8IXT2 367 aaPredicted RBP19.46■□□□□ 0.71
SHMT1-203ENST00000354098 ACBD4Q8NC06 268 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 EME1Q96AY2 570 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 C9orf16Q9BUW7 83 aa19.46■□□□□ 0.71
SHMT1-203ENST00000354098 DHHO43323 396 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 PGGHGQ32M88 737 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 MEX3BQ6ZN04 569 aaKnown RBP19.45■□□□□ 0.7
SHMT1-203ENST00000354098 SDR9C7Q8NEX9 313 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 STEAP2Q8NFT2 490 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 OR52E2Q8NGJ4 325 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 OR1K1Q8NGR3 316 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 NSMAFQ92636 917 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 MUS81Q96NY9 551 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 RBP7Q96R05 134 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 SYT4Q9H2B2 425 aa19.45■□□□□ 0.7
SHMT1-203ENST00000354098 A0A096LPE4 126 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 A0A1W2PPZ6 126 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 TUBAL3A6NHL2 446 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 ZNF99A8MXY4 864 aaPredicted RBP19.44■□□□□ 0.7
SHMT1-203ENST00000354098 POLR2IP36954 125 aaKnown RBP19.44■□□□□ 0.7
SHMT1-203ENST00000354098 ZNF133P52736 654 aaPredicted RBP19.44■□□□□ 0.7
SHMT1-203ENST00000354098 CDK5Q00535 292 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 TGFBR3Q03167 851 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 TRIP10Q15642 601 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 STK11Q15831 433 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 LRRC36Q1X8D7 754 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 HIKESHIQ53FT3 197 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 THEM4Q5T1C6 240 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 LPCAT4Q643R3 524 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 SLC27A4Q6P1M0 643 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 LEG1Q6P5S2 330 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 SLC25A47Q6Q0C1 308 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 ZBTB49Q6ZSB9 765 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 ADCK1Q86TW2 530 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 HTRA1Q92743 480 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 NELFAQ9H3P2 528 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 USE1Q9NZ43 259 aa19.44■□□□□ 0.7
SHMT1-203ENST00000354098 VSX1Q9NZR4 365 aaPredicted RBP19.44■□□□□ 0.7
SHMT1-203ENST00000354098 A0A1W2PR80 420 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 ALDH3A2P51648 485 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 ESRRGP62508 458 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.43■□□□□ 0.7
SHMT1-203ENST00000354098 PTGES3Q15185 160 aaKnown RBP19.43■□□□□ 0.7
SHMT1-203ENST00000354098 ETFDHQ16134 617 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 C10orf128Q5T292 105 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 HIST2H2BCQ6DN03 193 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 JAZF1Q86VZ6 243 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 NPEPL1Q8NDH3 523 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 ZC3HAV1LQ96H79 300 aaKnown RBP19.43■□□□□ 0.7
SHMT1-203ENST00000354098 TSSK2Q96PF2 358 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 BAIAP2Q9UQB8 552 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 OR6C68A6NDL8 312 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 CTLA4P16410 223 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 KIR2DL3P43628 341 aa19.43■□□□□ 0.7
SHMT1-203ENST00000354098 OR7E24Q6IFN5 339 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms