RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CXCL17Q6UXB2 119 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 C12orf54Q6X4T0 127 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 USP43Q70EL4 1123 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 THOC6Q86W42 341 aaKnown RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SLC26A11Q86WA9 606 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 C9orf40Q8IXQ3 194 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SELENOHQ8IZQ5 122 aaKnown RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 FBXL13Q8NEE6 735 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 OR7G2Q8NG99 324 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 NUBPLQ8TB37 319 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ZBED6CLQ96FA7 236 aaPredicted RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 P2RY13Q9BPV8 354 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 LZTS2Q9BRK4 669 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 HCAR1Q9BXC0 346 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 OCR1Q9BZK8 76 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 UCK2Q9BZX2 261 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 NMUR2Q9GZQ4 415 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 EHFQ9NZC4 300 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 KCNG2Q9UJ96 466 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 PROCRQ9UNN8 238 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 POFUT2Q9Y2G5 429 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TNFRSF18Q9Y5U5 241 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ABCA7Q8IZY2 2146 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 PALLDQ8WX93 1383 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 PIK3R4Q99570 1358 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 PLEKHH1Q9ULM0 1364 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 MYO5BQ9ULV0 1848 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 IGLV4-3A0A075B6K6 122 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 IQANK1A0A1B0GTG1 560 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 OR6C74A6NCV1 312 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SRRM5B3KS81 715 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NEMFO60524 1076 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RENP00797 406 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 T-ENOLP0DO92 83 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NR2C1P13056 603 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 IGHV1-2P23083 117 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 CXCR2P25025 360 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 U2AF2P26368 475 aaKnown RBP eCLIP1.28□□□□□ -2.21e-6■■■□□ 19.1
BRCA1-202ENST00000354071 GABRR2P28476 465 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 OPRD1P41143 372 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 GYG1P46976 350 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 LCN2P80188 198 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 MAB21L1Q13394 359 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RCAN2Q14206 197 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 CNPY1Q3B7I2 92 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 LIN9Q5TKA1 542 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 BSPRYQ5W0U4 402 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ARMCX5Q6P1M9 558 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 CCDC137Q6PK04 289 aaKnown RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SLC25A48Q6ZT89 311 aaKnown RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF248Q8NDW4 579 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 DTX3LQ8TDB6 740 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 PIH1D2Q8WWB5 315 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NR4A3Q92570 626 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 TFGQ92734 400 aaPredicted RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 WBP1Q96G27 269 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ART5Q96L15 291 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 GAL3ST1Q99999 423 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 PAIP2Q9BPZ3 127 aaKnown RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SLC35A5Q9BS91 424 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 IQCGQ9H095 443 aaKnown RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 GAL3ST2Q9H3Q3 398 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 TREM1Q9NP99 234 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF275Q9NSD4 429 aaPredicted RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SPRR3Q9UBC9 169 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 GNPTGQ9UJJ9 305 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SCML1Q9UN30 329 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 UACAQ9BZF9 1416 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ITPR1Q14643 2758 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 PNPLA6Q8IY17 1366 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ALMS1Q8TCU4 4167 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 IGHV4-30-2A0A087WSY4 118 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 A6NIZ1 184 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 EFCAB7A8K855 629 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SERPINE3A8MV23 424 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF487B1APH4 448 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 EPM2AB3EWF7 344 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 E9PLD3 99 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 K7N7A8 449 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 MCF2P10911 925 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 H2AFXP16104 143 aaPredicted RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 PMCHP20382 165 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 AQP1P29972 269 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 KLK7P49862 253 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RAP1BP61224 184 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 LMO4P61968 165 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 OR5I1Q13606 314 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 MTHFSDQ2M296 383 aaKnown RBP1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NKAIN1Q4KMZ8 207 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 GPR157Q5UAW9 335 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 METTL11BQ5VVY1 283 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ANKRD26P1Q6NSI1 321 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 TRIM40Q6P9F5 258 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 NDUFAF7Q7L592 441 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 C6orf223Q8N319 242 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF502Q8TBZ5 544 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 ITLN1Q8WWA0 313 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 SGK3Q96BR1 496 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 FEM1AQ9BSK4 669 aa1.28□□□□□ -2.2
BRCA1-202ENST00000354071 RACGAP1Q9H0H5 632 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms