RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 UBE2ZQ9H832 354 aaPredicted RBP19.67■□□□□ 0.74
SHMT1-202ENST00000352886 B9D1Q9UPM9 204 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 ARID1BQ8NFD5 2236 aaPredicted RBP19.67■□□□□ 0.74
SHMT1-202ENST00000352886 CPAMD8Q8IZJ3 1885 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 PRSS37A4D1T9 235 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 ANXA2P2A6NMY6 339 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 PHYHO14832 338 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 FADS1O60427 444 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 ANXA2P07355 339 aaKnown RBP19.67■□□□□ 0.74
SHMT1-202ENST00000352886 CCR9P51686 369 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 RPL27P61353 136 aaKnown RBP19.67■□□□□ 0.74
SHMT1-202ENST00000352886 GALK2Q01415 458 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 SLC35D2Q76EJ3 337 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.67■□□□□ 0.74
SHMT1-202ENST00000352886 ADGRG3Q86Y34 549 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 DND1Q8IYX4 353 aaKnown RBP19.67■□□□□ 0.74
SHMT1-202ENST00000352886 OR8K3Q8NH51 312 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 GPR148Q8TDV2 347 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 FCAMRQ8WWV6 532 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 HAVCR1Q96D42 359 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 C20orf85Q9H1P6 137 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 BEX1Q9HBH7 125 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 HRASLSQ9HDD0 168 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 EMC7Q9NPA0 242 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 NKIRAS2Q9NYR9 191 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 ING4Q9UNL4 249 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 FKBP7Q9Y680 259 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 ADAMTS20P59510 1910 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 IGHV3-20A0A0C4DH32 117 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 NPIPB7O75200 414 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 KRT33AO76009 404 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 ZNF432O94892 652 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 PTHLHP12272 177 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 ANXA3P12429 323 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 CDK2P24941 298 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 ART1P52961 327 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 GPLD1P80108 840 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 ST3GAL2Q16842 350 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 TMEM255AQ5JRV8 349 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 LRRN1Q6UXK5 716 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 DUSP19Q8WTR2 217 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 ATOH1Q92858 354 aaPredicted RBP19.66■□□□□ 0.74
SHMT1-202ENST00000352886 MIB2Q96AX9 1013 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 MS4A3Q96HJ5 214 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 SEMA5BQ9P283 1151 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 OR6C76A6NM76 312 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 TNFRSF10AO00220 468 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 ECDO95905 644 aaPredicted RBP19.66■□□□□ 0.74
SHMT1-202ENST00000352886 POU3F3P20264 500 aaPredicted RBP19.66■□□□□ 0.74
SHMT1-202ENST00000352886 RASGEF1BQ0VAM2 473 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 C1orf140Q5VVS0 124 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 C9orf62Q8N4C0 152 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 ZNF519Q8TB69 540 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 GPR119Q8TDV5 335 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 DCBLD2Q96PD2 775 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 NUDT22Q9BRQ3 303 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 OR11A1Q9GZK7 315 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 ACTR6Q9GZN1 396 aa19.66■□□□□ 0.74
SHMT1-202ENST00000352886 TRBV5-7A0A0A0MS05 114 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 A8MVM7 634 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 SULT1B1O43704 296 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 SLC16A7O60669 478 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 KIR3DL2P43630 455 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 MEP1BQ16820 701 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 WDR38Q5JTN6 314 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 FAM209AQ5JX71 171 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 GRINAQ7Z429 371 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 ZNF417Q8TAU3 575 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 C4orf45Q96LM5 186 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 ELOVL3Q9HB03 270 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 ZFP64Q9NPA5 681 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 TAS2R10Q9NYW0 307 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 ETV7Q9Y603 341 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 BCAT2O15382 392 aaPredicted RBP19.65■□□□□ 0.74
SHMT1-202ENST00000352886 KHDRBS3O75525 346 aaKnown RBP19.65■□□□□ 0.74
SHMT1-202ENST00000352886 RAF1P04049 648 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 INSM1Q01101 510 aaPredicted RBP19.65■□□□□ 0.74
SHMT1-202ENST00000352886 C16orf47Q6ZP98 133 aaPredicted RBP19.65■□□□□ 0.74
SHMT1-202ENST00000352886 PRSS42Q7Z5A4 293 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 OR8B4Q96RC9 309 aa19.65■□□□□ 0.74
SHMT1-202ENST00000352886 TMA7Q9Y2S6 64 aaKnown RBP19.65■□□□□ 0.74
SHMT1-202ENST00000352886 HSPB2A8KAH6 182 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 H0YC42 278 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 DXOO77932 396 aaKnown RBP19.64■□□□□ 0.74
SHMT1-202ENST00000352886 OR6A2O95222 327 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 GIMD1P0DJR0 217 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 AFF3P51826 1226 aaKnown RBP19.64■□□□□ 0.74
SHMT1-202ENST00000352886 AP3S2P59780 193 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 HSPB2Q16082 182 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 OR5M10Q6IEU7 315 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 CREB3L2Q70SY1 520 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 EID2Q8N6I1 236 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 OR11G2Q8NGC1 345 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 TXNIPQ9H3M7 391 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 FLVCR2Q9UPI3 526 aa19.64■□□□□ 0.74
SHMT1-202ENST00000352886 SPARCP09486 303 aa19.64■□□□□ 0.73
SHMT1-202ENST00000352886 FREM3P0C091 2139 aa19.64■□□□□ 0.73
SHMT1-202ENST00000352886 TMIGD3P0DMS9 266 aaPredicted RBP19.64■□□□□ 0.73
SHMT1-202ENST00000352886 HTR2BP41595 481 aa19.64■□□□□ 0.73
SHMT1-202ENST00000352886 ETFDHQ16134 617 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms