RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 NAA40Q86UY6 237 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 ZSCAN1Q8NBB4 408 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 OR52E2Q8NGJ4 325 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 OR2L8Q8NGY9 312 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 EDARADDQ8WWZ3 215 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 SMARCD2Q92925 531 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 ZNF285Q96NJ3 590 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 NRIP2Q9BQI9 281 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 TIMM29Q9BSF4 260 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 ATG4BQ9Y4P1 393 aa13.6□□□□□ -0.23
TRAF3-202ENST00000351691 TRBV5-7A0A0A0MS05 114 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 A0A0G2JN53 185 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 IGLON5A6NGN9 336 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PHYHO14832 338 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 TACSTD2P09758 323 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 MYOGP15173 224 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 AGAP20933 346 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 CERS1P27544 350 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 NAA10P41227 235 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 TSFMP43897 325 aaKnown RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 NKPD1Q17RQ9 610 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PLEKHN1Q494U1 663 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 KDF1Q8NAX2 398 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 OR9A2Q8NGT5 310 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 OR51A7Q8NH64 312 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PHOSPHO1Q8TCT1 267 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 HSPA12BQ96MM6 686 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 ASB16Q96NS5 453 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 SLCO5A1Q9H2Y9 848 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 SYNPO2LQ9H987 977 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 MEPEQ9NQ76 525 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PRDM7Q9NQW5 492 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 REV3LO60673 3130 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 ZNF729A6NN14 1252 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 AK1P00568 194 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 ANXA2P07355 339 aaKnown RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 LAMP2P13473 410 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 NID1P14543 1247 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PSMB5P28074 263 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 CSNK1EP49674 416 aaKnown RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 RAB28P51157 221 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 NANOS3P60323 173 aaKnown RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 SRSF3P84103 164 aaKnown RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 DHRS2Q13268 280 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 FHL1Q13642 323 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PSRC1Q6PGN9 363 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 TMEM205Q6UW68 189 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 TMPRSS12Q86WS5 348 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 ACOT4Q8N9L9 421 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 ZNF417Q8TAU3 575 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PAQR8Q8TEZ7 354 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PPP1R1CQ8WVI7 109 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PMM1Q92871 262 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 SAT2Q96F10 170 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 TNFRSF13CQ96RJ3 184 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PAPOLGQ9BWT3 736 aaKnown RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 PHPT1Q9NRX4 125 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-202ENST00000351691 ZNF780BQ9Y6R6 833 aa13.59□□□□□ -0.23
TRAF3-202ENST00000351691 C5orf42Q9H799 3197 aa13.58□□□□□ -0.23
TRAF3-202ENST00000351691 TEX13DA0A0J9YY54 714 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-202ENST00000351691 PPM1DO15297 605 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 P2RX6O15547 441 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ICOSLGO75144 302 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 TEX30Q5JUR7 227 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ABHD17CQ6PCB6 329 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 BAP18Q8IXM2 172 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ZNF619Q8N2I2 560 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 LINC01555Q8NAE3 123 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 SLC16A11Q8NCK7 471 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 MS4A6EQ96DS6 147 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 INSM2Q96T92 566 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-202ENST00000351691 SDF2Q99470 211 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ZNF559Q9BR84 538 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ZNF350Q9GZX5 532 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 SEC61A2Q9H9S3 476 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 TRPV4Q9HBA0 871 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ASH2LQ9UBL3 628 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 DHCR7Q9UBM7 475 aaKnown RBP13.58□□□□□ -0.24
TRAF3-202ENST00000351691 DMRT1Q9Y5R6 373 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 OR2W5A6NFC9 320 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 GRXCR1A8MXD5 290 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 RAB3DO95716 219 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 CD14P08571 375 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 C8orf89P0DMQ9 161 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ZNF44P15621 663 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 PRKXP51817 358 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ATP1B3P54709 279 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ALKBH1Q13686 389 aaKnown RBP13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ATPAF1Q5TC12 328 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-202ENST00000351691 TMEM200AQ86VY9 491 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ZNF595Q8IYB9 648 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 OR2A1Q8NGT9 310 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 THRSPQ92748 146 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 WNT2BQ93097 391 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 SGK3Q96BR1 496 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 ZBTB8AQ96BR9 441 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 TUBA4BQ9H853 241 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 MRPS30Q9NP92 439 aaKnown RBP13.58□□□□□ -0.24
TRAF3-202ENST00000351691 TM7SF3Q9NS93 570 aa13.58□□□□□ -0.24
TRAF3-202ENST00000351691 CDV3Q9UKY7 258 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms