RNA–Protein interactions for RNA: ENST00000348124.5

TRAF6-201, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 2,558 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-201ENST00000348124 TSSK2Q96PF2 358 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 NKX3-1Q99801 234 aaPredicted RBP13.94□□□□□ -0.18
TRAF6-201ENST00000348124 SLC25A21Q9BQT8 299 aaPredicted RBP13.94□□□□□ -0.18
TRAF6-201ENST00000348124 ATG5Q9H1Y0 275 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 TMEM231Q9H6L2 316 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 MBD2Q9UBB5 411 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 PLEKHA6Q9Y2H5 1048 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 TRBV5-7A0A0A0MS05 114 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 MEX3AA1L020 520 aaKnown RBP13.94□□□□□ -0.18
TRAF6-201ENST00000348124 FAM25EA8MYX2 175 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 SGCEO43556 437 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 ACAA2P42765 397 aaKnown RBP13.94□□□□□ -0.18
TRAF6-201ENST00000348124 VASPP50552 380 aaPredicted RBP13.94□□□□□ -0.18
TRAF6-201ENST00000348124 DEFB134Q4QY38 66 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 ARHGAP40Q5TG30 622 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 CNTNAP3BQ96NU0 1288 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 RAB11FIP5Q9BXF6 653 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 TRIM2Q9C040 744 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 TREM1Q9NP99 234 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 TMEM74BQ9NUR3 256 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 IKZF2Q9UKS7 526 aa13.94□□□□□ -0.18
TRAF6-201ENST00000348124 IGLON5A6NGN9 336 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 FGF16O43320 207 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 KCNAB3O43448 404 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 CDC40O60508 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 HLA-AP01891 365 aaKnown RBP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 FABP1P07148 127 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 CMPK1P30085 196 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 PNLIPRP2P54317 469 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 RUNX2Q13950 521 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 INPP5JQ15735 1006 aaPredicted RBP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 ZNF77Q15935 545 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 C2orf76Q3KRA6 126 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 C3orf33Q6P1S2 294 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 SLC39A5Q6ZMH5 540 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 NDUFAF7Q7L592 441 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 SLC16A13Q7RTY0 426 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 INO80EQ8NBZ0 244 aaPredicted RBP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 KREMEN2Q8NCW0 462 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 ARL11Q969Q4 196 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 ZBTB8AQ96BR9 441 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 GAL3ST1Q99999 423 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 MKKSQ9NPJ1 570 aaPredicted RBP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 YBX2Q9Y2T7 364 aaKnown RBP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 TRAV20A0A0B4J274 112 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 OR4C45A6NMZ5 311 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 ITGA5P08648 1049 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 NFYBP25208 207 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 PTGFRP43088 359 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 SSBP1Q04837 148 aaKnown RBP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 SCGB2B2Q4G0G5 96 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 TCEAL5Q5H9L2 206 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 EXOSC6Q5RKV6 272 aaKnown RBP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 PRAMEF17Q5VTA0 474 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 KIRREL2Q6UWL6 708 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 USP53Q70EK8 1073 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 SLC16A9Q7RTY1 509 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 ZNF595Q8IYB9 648 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 SHISA5Q8N114 240 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 FAM3DQ96BQ1 224 aa13.93□□□□□ -0.18
TRAF6-201ENST00000348124 DNAJB12Q9NXW2 375 aaKnown RBP13.93□□□□□ -0.18
TRAF6-201ENST00000348124 PRRT4C9JH25 899 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 LILRB3O75022 631 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 ALOX12BO75342 701 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 ABHD16AO95870 558 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 CDKN2AP42771 156 aaKnown RBP13.92□□□□□ -0.18
TRAF6-201ENST00000348124 DHCR24Q15392 516 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 OR7A5Q15622 319 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 RAB11BQ15907 218 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 ZNF425Q6IV72 752 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 OR2G2Q8NGZ5 317 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 SEH1LQ96EE3 360 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 RBM18Q96H35 190 aaKnown RBP13.92□□□□□ -0.18
TRAF6-201ENST00000348124 STACQ99469 402 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 COMMD4Q9H0A8 199 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 FARSAQ9Y285 508 aaKnown RBP13.92□□□□□ -0.18
TRAF6-201ENST00000348124 TICRRQ7Z2Z1 1910 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 ZNF860A6NHJ4 632 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 ARPC3O15145 178 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 MOSPD3O75425 235 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 CSN2P05814 226 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 ZNF806P0C7X5 589 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 TLX1P31314 330 aaPredicted RBP13.92□□□□□ -0.18
TRAF6-201ENST00000348124 P2RY2P41231 377 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 PRKXP51817 358 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 SNRPEP62304 92 aaKnown RBP13.92□□□□□ -0.18
TRAF6-201ENST00000348124 HNRNPA1L2Q32P51 320 aaKnown RBP13.92□□□□□ -0.18
TRAF6-201ENST00000348124 LINC00114Q6XXX2 140 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 TMEM229BQ8NBD8 167 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 OR5AP2Q8NGF4 316 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 GPR148Q8TDV2 347 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 LMF1Q96S06 567 aa13.92□□□□□ -0.18
TRAF6-201ENST00000348124 MYOZ1Q9NP98 299 aaPredicted RBP13.92□□□□□ -0.18
TRAF6-201ENST00000348124 LOC100289279A0A1B0GTE1 492 aa13.91□□□□□ -0.18
TRAF6-201ENST00000348124 C1QTNF3-AMACRE9PGA6 284 aa13.91□□□□□ -0.18
TRAF6-201ENST00000348124 PQBP1O60828 265 aaKnown RBP13.91□□□□□ -0.18
TRAF6-201ENST00000348124 ELAVL3Q14576 367 aaKnown RBP13.91□□□□□ -0.18
TRAF6-201ENST00000348124 ULK3Q6PHR2 472 aa13.91□□□□□ -0.18
TRAF6-201ENST00000348124 ZNF627Q7L945 461 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms