RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 MEPEQ9NQ76 525 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-202ENST00000347617 COMMD9Q9P000 198 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 CDV3Q9UKY7 258 aaKnown RBP14.45□□□□□ -0.1
HMGA1-202ENST00000347617 NUP210LQ5VU65 1888 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 A0A0B4J2E0 115 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 TRBV5-5A0A0J9YX44 114 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 A0A1B0GX12 115 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 TMEM218A2RU14 115 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 IMPA2O14732 288 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 MEOX2P50222 304 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 UBE2IP63279 158 aaKnown RBP14.44□□□□□ -0.1
HMGA1-202ENST00000347617 ZP2Q05996 745 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 GRM7Q14831 915 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 C2orf68Q2NKX9 166 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 C4orf46Q504U0 113 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 DCST2Q5T1A1 773 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 C10orf91Q5T1B1 145 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 FAM111BQ6SJ93 734 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 SKA3Q8IX90 412 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 BEST3Q8N1M1 668 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 RFLNBQ8N5W9 214 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 AVL9Q8NBF6 648 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 TMEM185AQ8NFB2 350 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 OR4E2Q8NGC2 313 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 TNFRSF13CQ96RJ3 184 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 C2orf42Q9NWW7 574 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 SPHK1Q9NYA1 384 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 STEAP1Q9UHE8 339 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 TNFSF18Q9UNG2 199 aa14.44□□□□□ -0.1
HMGA1-202ENST00000347617 C19orf53Q9UNZ5 99 aaPredicted RBP14.44□□□□□ -0.1
HMGA1-202ENST00000347617 CARHSP1Q9Y2V2 147 aaKnown RBP14.44□□□□□ -0.1
HMGA1-202ENST00000347617 SPTBN5Q9NRC6 3674 aaKnown RBP14.43□□□□□ -0.1
HMGA1-202ENST00000347617 A0A087WV62 115 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 TRAV14DV4A0A0A6YYC5 116 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 C19orf67A6NJJ6 358 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 TTLL8A6PVC2 850 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 C4orf51C9J302 202 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 ARPC3O15145 178 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 SRPX2O60687 465 aaPredicted RBP14.43□□□□□ -0.1
HMGA1-202ENST00000347617 GYPBP06028 91 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 ANXA2P07355 339 aaKnown RBP14.43□□□□□ -0.1
HMGA1-202ENST00000347617 RPL35P42766 123 aaKnown RBP14.43□□□□□ -0.1
HMGA1-202ENST00000347617 NR0B1P51843 470 aaKnown RBP14.43□□□□□ -0.1
HMGA1-202ENST00000347617 RPS15AP62244 130 aaKnown RBP14.43□□□□□ -0.1
HMGA1-202ENST00000347617 PPIAP62937 165 aaKnown RBP14.43□□□□□ -0.1
HMGA1-202ENST00000347617 TNFRSF17Q02223 184 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 LTB4RQ15722 352 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 VWA2Q5GFL6 755 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 DCAF12L2Q5VW00 463 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 FCRLBQ6BAA4 426 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 JMJD6Q6NYC1 403 aaPredicted RBP14.43□□□□□ -0.1
HMGA1-202ENST00000347617 FAAP20Q6NZ36 180 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 MAMSTRQ6ZN01 415 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 DPY19L2P2Q6ZN68 376 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 ACOT7LQ6ZUV0 252 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 LRRTM1Q86UE6 522 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 PARGQ86W56 976 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 CDRT4Q8N9R6 151 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 RELL2Q8NC24 303 aaPredicted RBP14.43□□□□□ -0.1
HMGA1-202ENST00000347617 OR4K14Q8NGD5 310 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 MNTQ99583 582 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 PDCD10Q9BUL8 212 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 SLCO5A1Q9H2Y9 848 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 FBXL4Q9UKA2 621 aa14.43□□□□□ -0.1
HMGA1-202ENST00000347617 A0A1B0GTI1 187 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 GGT3PA6NGU5 568 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 SNAPINO95295 136 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 HEXAP06865 529 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 GTF2F2P13984 249 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 NAA10P41227 235 aaPredicted RBP14.42□□□□□ -0.1
HMGA1-202ENST00000347617 TAS2R19P59542 299 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 SNTB1Q13884 538 aaKnown RBP14.42□□□□□ -0.1
HMGA1-202ENST00000347617 ZNF684Q5T5D7 378 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 OR2W3Q7Z3T1 314 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.42□□□□□ -0.1
HMGA1-202ENST00000347617 OR5M8Q8NGP6 311 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 OR1J4Q8NGS1 313 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 FLVCR1-AS1Q8TAF5 88 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 HSPA12BQ96MM6 686 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 NMNAT2Q9BZQ4 307 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 CPNE7Q9UBL6 633 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 CTSFQ9UBX1 484 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 TMEM272A0A1B0GTI8 110 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 A0A1W2PR77 199 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 CDC40O60508 579 aaKnown RBP eCLIP14.42□□□□□ -0.1
HMGA1-202ENST00000347617 GLCEO94923 617 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 GKN3PP0CG01 181 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 CTSEP14091 401 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 HLA-GP17693 338 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 TLX1P31314 330 aaPredicted RBP14.42□□□□□ -0.1
HMGA1-202ENST00000347617 PRSS3P35030 304 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 PSMB10P40306 273 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 GPR85P60893 370 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 DCDP81605 110 aaKnown RBP14.42□□□□□ -0.1
HMGA1-202ENST00000347617 ALKBH1Q13686 389 aaKnown RBP14.42□□□□□ -0.1
HMGA1-202ENST00000347617 C3orf33Q6P1S2 294 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 USP53Q70EK8 1073 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 NDUFAF7Q7L592 441 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 ZNF595Q8IYB9 648 aa14.42□□□□□ -0.1
HMGA1-202ENST00000347617 TMEM229BQ8NBD8 167 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms