RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 M1APQ8TC57 530 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 MRGPRX4Q96LA9 322 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 SMAD5Q99717 465 aaKnown RBP16.74■□□□□ 0.27
HOXA9-201ENST00000343483 WDR76Q9H967 626 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 CYSLTR2Q9NS75 346 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 PADI1Q9ULC6 663 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 SPTBN4Q9H254 2564 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 MASP2O00187 686 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 ZNF208O43345 1280 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 AKR7A3O95154 331 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 HLA-DQA2P01906 255 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 HLA-DOBP13765 273 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 CD59P13987 128 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 RAB3BP20337 219 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 RPS27P42677 84 aaKnown RBP16.73■□□□□ 0.27
HOXA9-201ENST00000343483 SLC25A35Q3KQZ1 300 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 NAXDQ8IW45 347 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 ZNF248Q8NDW4 579 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 OR4M1Q8NGD0 313 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 MFSD8Q8NHS3 518 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 FOXN4Q96NZ1 517 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 PDCD1LG2Q9BQ51 273 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 NEK6Q9HC98 313 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 MOV10Q9HCE1 1003 aaKnown RBP16.73■□□□□ 0.27
HOXA9-201ENST00000343483 RBFOX1Q9NWB1 397 aaKnown RBP16.73■□□□□ 0.27
HOXA9-201ENST00000343483 LAMP5Q9UJQ1 280 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 A0A1W2PPK0 400 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 HMX3A6NHT5 357 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 CDX4O14627 284 aaPredicted RBP16.73■□□□□ 0.27
HOXA9-201ENST00000343483 LYRM1O43325 122 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 JMJD7P0C870 316 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 OR8G3PP0DMU2 310 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 DLX5P56178 289 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 MFSD13AQ14CX5 517 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 CCDC58Q4VC31 144 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 OPN5Q6U736 354 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 PLET1Q6UQ28 207 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 C6orf15Q6UXA7 325 aaPredicted RBP16.73■□□□□ 0.27
HOXA9-201ENST00000343483 NDUFAF7Q7L592 441 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 FAM220AQ7Z4H9 259 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 CDC20BQ86Y33 519 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 OR2M3Q8NG83 312 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 OR4K17Q8NGC6 315 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 OR5M1Q8NGP8 315 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 OR6S1Q8NH40 331 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 TRMT10AQ8TBZ6 339 aaKnown RBP16.73■□□□□ 0.27
HOXA9-201ENST00000343483 ITFG2Q969R8 447 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 INTS14Q96SY0 518 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 CDCP1Q9H5V8 836 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 TMEM185BQ9H7F4 350 aa16.73■□□□□ 0.27
HOXA9-201ENST00000343483 KIF26BQ2KJY2 2108 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 ETV2O00321 342 aaPredicted RBP16.72■□□□□ 0.27
HOXA9-201ENST00000343483 EFNA2O43921 213 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 SLC16A7O60669 478 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 RPP14O95059 124 aaKnown RBP16.72■□□□□ 0.27
HOXA9-201ENST00000343483 ZNF806P0C7X5 589 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 PSKH1P11801 424 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 TCN2P20062 427 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 OTX2P32243 289 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 INSM1Q01101 510 aaPredicted RBP16.72■□□□□ 0.27
HOXA9-201ENST00000343483 TLE3Q04726 772 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 ZNF684Q5T5D7 378 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 OTPQ5XKR4 325 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 ZNF57Q68EA5 555 aaPredicted RBP16.72■□□□□ 0.27
HOXA9-201ENST00000343483 H1FNTQ75WM6 255 aaPredicted RBP16.72■□□□□ 0.27
HOXA9-201ENST00000343483 TRILQ7L0X0 811 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 DPY19L4Q7Z388 723 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.72■□□□□ 0.27
HOXA9-201ENST00000343483 DTX3Q8N9I9 347 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 POC1BQ8TC44 478 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 ZC3HAV1LQ96H79 300 aaKnown RBP16.72■□□□□ 0.27
HOXA9-201ENST00000343483 HDHD2Q9H0R4 259 aa16.72■□□□□ 0.27
HOXA9-201ENST00000343483 TRAV1-2A0A0B4J238 106 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 A8MV72 311 aaPredicted RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 FAM47E-STBD1D6RA91 191 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 MS4A18H0YCH9 400 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 PAHP00439 452 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 IGHMP01871 453 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 OPN1LWP04000 364 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 TRAPPC2P0DI81 140 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 TRAPPC2BP0DI82 140 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 NPR2P20594 1047 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 RBMS1P29558 406 aaKnown RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 DDOSTP39656 456 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 FOXK1P85037 733 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 MS4A18Q3C1V0 323 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 TBRG1Q3YBR2 411 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 GLCCI1Q86VQ1 547 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 YIPF7Q8N8F6 280 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 WDSUB1Q8N9V3 476 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 ZNF486Q96H40 463 aaPredicted RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 ST6GAL2Q96JF0 529 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 KLHL15Q96M94 604 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 C5orf34Q96MH7 638 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 KCNJ15Q99712 375 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 TSPAN10Q9H1Z9 355 aaPredicted RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 SERINC1Q9NRX5 453 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 IKZF2Q9UKS7 526 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 B9D1Q9UPM9 204 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 FAM240BA0A1B0GVZ2 78 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms