RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 RPP25Q9BUL9 199 aaKnown RBP11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 TBX21Q9UL17 535 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 ENTPD2Q9Y5L3 495 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 OR6C68A6NDL8 312 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 OR5K4A6NMS3 321 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 SCGNO76038 276 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 CT62P0C5K7 136 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 SLC35E2P0CK97 266 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF14P17017 642 aaPredicted RBP11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 P2RX1P51575 399 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 EMP2P54851 167 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 NKAIN2Q5VXU1 208 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 FBXO46Q6PJ61 603 aaPredicted RBP11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 VN1R4Q7Z5H5 301 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 ZFP82Q8N141 532 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 PGAM5Q96HS1 289 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 ADGRL4Q9HBW9 690 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 GDE1Q9NZC3 331 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 RABL2AQ9UBK7 228 aaPredicted RBP11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 PDCD11Q14690 1871 aaKnown RBP11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 IGHV3-20A0A0C4DH32 117 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 PPP1CAP62136 330 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 EEF1A1P5Q5VTE0 462 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 SFTPA2Q8IWL1 248 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 C16orf52Q8NHV5 167 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 FGGYQ96C11 551 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 NXF5Q9H1B4 397 aaKnown RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 WDR76Q9H967 626 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 RGPD3A6NKT7 1758 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 RGPD4Q7Z3J3 1758 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF850A8MQ14 1090 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 KRBOX1C9JBD0 128 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 H3BUI4 141 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 PLPP2O43688 288 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 EML2O95834 649 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 CISD3P0C7P0 127 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 MMP15P51511 669 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 MAP2K6P52564 334 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 RAB38P57729 211 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 LGALSLQ3ZCW2 172 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 B3GNTL1Q67FW5 361 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 PXT1Q8NFP0 134 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 OR4S1Q8NGB4 309 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 TMEM234Q8WY98 164 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 RSPRY1Q96DX4 576 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 LRRC46Q96FV0 321 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 SLC41A2Q96JW4 573 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 LMF2Q9BU23 707 aaKnown RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 STEAP1Q9UHE8 339 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 CA14Q9ULX7 337 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 B3GALT1Q9Y5Z6 326 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF646O15015 1829 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 DRD3P35462 400 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF704Q6ZNC4 412 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 OVCH1Q7RTY7 1134 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF784Q8NCA9 323 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 OR5H2Q8NGV7 314 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 FOXRED1Q96CU9 486 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 FKRPQ9H9S5 495 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 A0A0B4J293 547 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 PMP2P02689 132 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 GAAP10253 952 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 LIMS1P48059 325 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 TPMTP51580 245 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 EIF5AP63241 154 aaKnown RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 C2orf76Q3KRA6 126 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 FAM122CQ6P4D5 195 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 CD300LDQ6UXZ3 194 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 NUDCD2Q8WVJ2 157 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 GIMAP5Q96F15 307 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 TCEAL2Q9H3H9 227 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 APMAPQ9HDC9 416 aa11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 MEPEQ9NQ76 525 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 COA3Q9Y2R0 106 aaPredicted RBP11.35□□□□□ -0.59
SNRNP48-201ENST00000342415 SBF1O95248 1867 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 A0A1W2PPV9 198 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 TMEM212A6NML5 194 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 UTS2O95399 124 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 TMEM225BP0DP42 221 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 FBLP22087 321 aaKnown RBP11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 RPL18Q07020 188 aaKnown RBP11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 PHF19Q5T6S3 580 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 OR2AK2Q8NG84 335 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 C2CD4CQ8TF44 421 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 THRSPQ92748 146 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 HHIPL1Q96JK4 782 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 LHX9Q9NQ69 397 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 TAS2R4Q9NYW5 299 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 VSTM2BA6NLU5 285 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 RAB6AP20340 208 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 RGS19P49795 217 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 NPY4RP50391 375 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 AGFG1P52594 562 aaKnown RBP11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF85Q03923 595 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 ELOCQ15369 112 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 TMEM156Q8N614 296 aa11.34□□□□□ -0.59
SNRNP48-201ENST00000342415 MFSD8Q8NHS3 518 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms