RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 TRMT10AQ8TBZ6 339 aaKnown RBP13.34□□□□□ -0.27
PBX3-201ENST00000342287 GNPDA2Q8TDQ7 276 aa13.34□□□□□ -0.27
PBX3-201ENST00000342287 HS6ST2Q96MM7 605 aa13.34□□□□□ -0.27
PBX3-201ENST00000342287 OR2M2Q96R28 347 aa13.34□□□□□ -0.27
PBX3-201ENST00000342287 GAL3ST4Q96RP7 486 aa13.34□□□□□ -0.27
PBX3-201ENST00000342287 DNAJB12Q9NXW2 375 aaKnown RBP13.34□□□□□ -0.27
PBX3-201ENST00000342287 TAS2R3Q9NYW6 316 aa13.34□□□□□ -0.27
PBX3-201ENST00000342287 AKAP7Q9P0M2 348 aaPredicted RBP13.34□□□□□ -0.27
PBX3-201ENST00000342287 ING1Q9UK53 422 aaPredicted RBP13.34□□□□□ -0.27
PBX3-201ENST00000342287 WDFY4Q6ZS81 3184 aa13.34□□□□□ -0.27
PBX3-201ENST00000342287 TTC28Q96AY4 2481 aa13.34□□□□□ -0.27
PBX3-201ENST00000342287 G3V3Q6 166 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 IL1AP01583 271 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 CCKBRP32239 447 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 CDC42P60953 191 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 PPP3R1P63098 170 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 PLAURQ03405 335 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 TMEM91Q6ZNR0 172 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 CLDN22Q8N7P3 220 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 PIGXQ8TBF5 258 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 CMKLR1Q99788 373 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 TMEM27Q9HBJ8 222 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 UBQLN4Q9NRR5 601 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 LHX6Q9UPM6 363 aa13.33□□□□□ -0.27
PBX3-201ENST00000342287 FRYLO94915 3013 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 SERINC4A6NH21 518 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 H3BN98 237 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 LANCL1O43813 399 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 GATBO75879 557 aaKnown RBP13.33□□□□□ -0.28
PBX3-201ENST00000342287 NTRK2Q16620 822 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 ST3GAL2Q16842 350 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 LCN10Q6JVE6 187 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 MBOAT2Q6ZWT7 520 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 ZNF550Q7Z398 422 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 PRICKLE2Q7Z3G6 844 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 NAXDQ8IW45 347 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 PUSL1Q8N0Z8 303 aaKnown RBP13.33□□□□□ -0.28
PBX3-201ENST00000342287 EIF4E3Q8N5X7 224 aaKnown RBP13.33□□□□□ -0.28
PBX3-201ENST00000342287 NANOGP1Q8N7R0 232 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 BOLLQ8N9W6 283 aaKnown RBP13.33□□□□□ -0.28
PBX3-201ENST00000342287 AP3S1Q92572 193 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 LMF1Q96S06 567 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 CDCA4Q9BXL8 241 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 WWTR1Q9GZV5 400 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 ALX4Q9H161 411 aaPredicted RBP13.33□□□□□ -0.28
PBX3-201ENST00000342287 COL5A1P20908 1838 aaPredicted RBP13.33□□□□□ -0.28
PBX3-201ENST00000342287 ASCC3Q8N3C0 2202 aaKnown RBP13.33□□□□□ -0.28
PBX3-201ENST00000342287 FER1L5A0AVI2 2057 aa13.33□□□□□ -0.28
PBX3-201ENST00000342287 NR2C1P13056 603 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 MUC1P15941 1255 aaPredicted RBP13.32□□□□□ -0.28
PBX3-201ENST00000342287 GPR143P51810 404 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 NR0B1P51843 470 aaKnown RBP13.32□□□□□ -0.28
PBX3-201ENST00000342287 SPHARQ15513 63 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 ZNF613Q6PF04 617 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 RXFP4Q8TDU9 374 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 TMEM255BQ8WV15 326 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 GPA33Q99795 319 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 SPEGQ15772 3267 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 IGHV3-20A0A0C4DH32 117 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 B4E171 279 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 SOX14O95416 240 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 CSTAP01040 98 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 CYC1P08574 325 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 SULT1A3P0DMM9 295 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 SULT1A4P0DMN0 295 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 ZNF28P17035 718 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 SPI1P17947 270 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 PTBP1P26599 531 aaKnown RBP eCLIP13.32□□□□□ -0.28
PBX3-201ENST00000342287 ACAA2P42765 397 aaKnown RBP13.32□□□□□ -0.28
PBX3-201ENST00000342287 SSPNQ14714 243 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 NCF4Q15080 339 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 MRPL14Q6P1L8 145 aaKnown RBP13.32□□□□□ -0.28
PBX3-201ENST00000342287 SERPINA12Q8IW75 414 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 WNT2BQ93097 391 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 LRFN5Q96NI6 719 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 TRIM2Q9C040 744 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 WDR54Q9H977 334 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 KRCC1Q9NPI7 259 aaPredicted RBP13.32□□□□□ -0.28
PBX3-201ENST00000342287 C11orf16Q9NQ32 467 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 SLC35A3Q9Y2D2 325 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 KMT2EQ8IZD2 1858 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 MPZL2O60487 215 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 OMPP47874 163 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 TSPAN31Q12999 210 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 RNF212Q495C1 297 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 ELP2Q6IA86 826 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 RNF113BQ8IZP6 322 aaKnown RBP13.32□□□□□ -0.28
PBX3-201ENST00000342287 RELL2Q8NC24 303 aaPredicted RBP13.32□□□□□ -0.28
PBX3-201ENST00000342287 C17orf47Q8NEP4 570 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 C14orf144Q96I85 54 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 PRSS27Q9BQR3 290 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 KATNB1Q9BVA0 655 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 ULBP3Q9BZM4 244 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 AKIRIN1Q9H9L7 192 aaPredicted RBP13.32□□□□□ -0.28
PBX3-201ENST00000342287 NXT1Q9UKK6 140 aaKnown RBP13.32□□□□□ -0.28
PBX3-201ENST00000342287 DMRT1Q9Y5R6 373 aa13.32□□□□□ -0.28
PBX3-201ENST00000342287 ICOSLGO75144 302 aa13.31□□□□□ -0.28
PBX3-201ENST00000342287 REM1O75628 298 aa13.31□□□□□ -0.28
PBX3-201ENST00000342287 IGFBP1P08833 259 aaPredicted RBP13.31□□□□□ -0.28
PBX3-201ENST00000342287 ADH7P40394 386 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms