RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 DOCK3Q8IZD9 2030 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 A0A0B4J2A0 478 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 MYADML2A6NDP7 307 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 CXorf65A6NEN9 183 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 IFITM10A6NMD0 228 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 MKRN2OSH3BPM6 223 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 SNRNP70P08621 437 aaKnown RBP16.88■□□□□ 0.29
SMPD1-201ENST00000342245 CLUP10909 449 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 MAKP20794 623 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 ZBTB25P24278 435 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 EIPR1Q53HC9 387 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 BTNL8Q6UX41 500 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 ETV3LQ6ZN32 361 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 OR2AP1Q8NGE2 309 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 TMEM239Q8WW34 195 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 RAB24Q969Q5 203 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 MISP3Q96FF7 219 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 AKR1E2Q96JD6 320 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 ZDHHC4Q9NPG8 344 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 SHPKQ9UHJ6 478 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 SIGLEC7Q9Y286 467 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 TRAV18A0A075B6X5 111 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 CDC40O60508 579 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF432O94892 652 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 GJB5O95377 273 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 ITGA5P08648 1049 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 PRLHRP49683 370 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 SLC26A5P58743 744 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF750Q32MQ0 723 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 TGIF2LXQ8IUE1 241 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 RFLNBQ8N5W9 214 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF740Q8NDX6 193 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 OR7D2Q96RA2 312 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 MYADMQ96S97 322 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 PRSS27Q9BQR3 290 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 PIGQQ9BRB3 760 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 METTL9Q9H1A3 318 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 FN3KRPQ9HA64 309 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 CLDND1Q9NY35 253 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 NTNG1Q9Y2I2 539 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 KCNIP3Q9Y2W7 256 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 TMED3Q9Y3Q3 217 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 CSAG2Q9Y5P2 127 aa16.88■□□□□ 0.29
SMPD1-201ENST00000342245 PLXND1Q9Y4D7 1925 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 ELOA3CA0A087WX78 387 aaPredicted RBP16.87■□□□□ 0.29
SMPD1-201ENST00000342245 CCSO14618 274 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 NARSO43776 548 aaKnown RBP16.87■□□□□ 0.29
SMPD1-201ENST00000342245 AK1P00568 194 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 AMY2AP04746 511 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 C5AR1P21730 350 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 CD1CP29017 333 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 RABIFP47224 123 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 CX3CR1P49238 355 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 NUTF2P61970 127 aaKnown RBP16.87■□□□□ 0.29
SMPD1-201ENST00000342245 SNRPD1P62314 119 aaKnown RBP16.87■□□□□ 0.29
SMPD1-201ENST00000342245 SRSF5Q13243 272 aaKnown RBP16.87■□□□□ 0.29
SMPD1-201ENST00000342245 DEFB115Q30KQ5 88 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 FAM129CQ86XR2 697 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 RSC1A1Q92681 617 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 PRSS16Q9NQE7 514 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 YIF1AO95070 293 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 AQP2P41181 271 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 HSD11B2P80365 405 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 GUCA2AQ02747 115 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 MEF2DQ14814 521 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF417Q8TAU3 575 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 F2RL3Q96RI0 385 aa16.87■□□□□ 0.29
SMPD1-201ENST00000342245 GDF2Q9UK05 429 aaPredicted RBP16.87■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF443Q9Y2A4 671 aaPredicted RBP16.87■□□□□ 0.29
SMPD1-201ENST00000342245 RTCAO00442 366 aaKnown RBP16.86■□□□□ 0.29
SMPD1-201ENST00000342245 TAAR5O14804 337 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 COCHO43405 550 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 RNH1P13489 461 aaKnown RBP16.86■□□□□ 0.29
SMPD1-201ENST00000342245 CSRP1P21291 193 aaKnown RBP16.86■□□□□ 0.29
SMPD1-201ENST00000342245 NME2P22392 152 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 SLC6A6P31641 620 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 RSU1Q15404 277 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 PRAMEF14Q5SWL7 426 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 CDPF1Q6NVV7 123 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 THSD4Q6ZMP0 1018 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 FAM24BQ8N5W8 94 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 TRAM1L1Q8N609 369 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 ZDHHC22Q8N966 263 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 UBAC2Q8NBM4 344 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 C2orf15Q8WU43 125 aaKnown RBP16.86■□□□□ 0.29
SMPD1-201ENST00000342245 ASB17Q8WXJ9 295 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 DVL3Q92997 716 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-201ENST00000342245 FBXO4Q9UKT5 387 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 FLVCR1Q9Y5Y0 555 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 M0R036 132 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 MOSPD3O75425 235 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 MED6O75586 246 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 PSMB10P40306 273 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 AKR1C3P42330 323 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 SULT1A2P50226 295 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF585AQ6P3V2 769 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 MAMDC2Q7Z304 686 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-201ENST00000342245 CYB561A3Q8NBI2 242 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 OR5T3Q8NGG3 340 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 MAFIPQ8WZ33 124 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms