RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 SLC38A4Q969I6 547 aa13.78□□□□□ -0.2
NECTIN1-202ENST00000340882 MOGAT1Q96PD6 335 aa13.78□□□□□ -0.2
NECTIN1-202ENST00000340882 PANX1Q96RD7 426 aa13.78□□□□□ -0.2
NECTIN1-202ENST00000340882 BEX1Q9HBH7 125 aa13.78□□□□□ -0.2
NECTIN1-202ENST00000340882 C1RLQ9NZP8 487 aa13.78□□□□□ -0.2
NECTIN1-202ENST00000340882 NPTNQ9Y639 398 aa13.78□□□□□ -0.2
NECTIN1-202ENST00000340882 TRAV36DV7A0A075B6V5 113 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 E9PBE3 544 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 ITM2AO43736 263 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 SERPINI2O75830 405 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 MFN2O95140 757 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 PLATP00750 562 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 BGLAPP02818 100 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 NQO1P15559 274 aaKnown RBP13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 MTNR1AP48039 350 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 PAX8Q06710 450 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 PMS2P3Q13401 168 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 LARS2Q15031 903 aaKnown RBP13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 FAM209AQ5JX71 171 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 SPATA46Q5T0L3 261 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 LRFN4Q6PJG9 635 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 COMTD1Q86VU5 262 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 TMEM54Q969K7 222 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 UBE2FQ969M7 185 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 APOPT1Q96IL0 206 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 MRI1Q9BV20 369 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 PATZ1Q9HBE1 687 aaKnown RBP13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 P2RX2Q9UBL9 471 aa13.77□□□□□ -0.21
NECTIN1-202ENST00000340882 A0A1B0GUS0 222 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 A0A1B0GWA3 101 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 ZNF726A6NNF4 738 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 TIMM23O14925 209 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 SNAP29O95721 258 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 PRB2P02812 416 aaPredicted RBP13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 SELEP16581 610 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 DRD4P21917 467 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 CSNK1A1P48729 337 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 ANXA11P50995 505 aaKnown RBP13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 UFM1P61960 85 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 PAX2Q02962 417 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 DEFB112Q30KQ8 113 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 FIP1L1Q6UN15 594 aaKnown RBP13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 NET1Q7Z628 596 aaPredicted RBP13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 OR1J1Q8NGS3 322 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 OR4F5Q8NH21 305 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 IPCEF1Q8WWN9 437 aaPredicted RBP13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 TMEM19Q96HH6 336 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 TMEM38BQ9NVV0 291 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 MKS1Q9NXB0 559 aa13.76□□□□□ -0.21
NECTIN1-202ENST00000340882 A8MXK9 166 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 F5H0A9 414 aaPredicted RBP13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 SPAG7O75391 227 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 NGFP01138 241 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 CRISP3P54108 245 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 BIDP55957 195 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 TXNL4AP83876 142 aaKnown RBP13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 TBC1D28Q2M2D7 210 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 THEM4Q5T1C6 240 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 Q6ZPA2 131 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 ZNF101Q8IZC7 436 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 TRIML2Q8N7C3 387 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 ZNF781Q8N8C0 355 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 BCL2L14Q9BZR8 327 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 RNF121Q9H920 327 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 MARCH7Q9H992 704 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 C12orf10Q9HB07 376 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 GLTPQ9NZD2 209 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 ZNF232Q9UNY5 417 aa13.75□□□□□ -0.21
NECTIN1-202ENST00000340882 TRAV40A0A0B4J280 105 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 CLPSL1A2RUU4 121 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 PLPP3O14495 311 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 PLXNB1O43157 2135 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 MT-ND5P03915 603 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 SERPINB5P36952 375 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 WNT5AP41221 380 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 CLNS1AP54105 237 aaKnown RBP13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 SLC3A1Q07837 685 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 PUDPQ08623 228 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 DPY19L1Q2PZI1 675 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 ZNF362Q5T0B9 420 aaPredicted RBP13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 BRD3OSQ6XYD6 125 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 CPEB3Q8NE35 698 aaKnown RBP13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 OR4K5Q8NGD3 323 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 FAM110DQ8TAY7 271 aaPredicted RBP13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 TCP10LQ8TDR4 215 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 MARS2Q96GW9 593 aaKnown RBP13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 OR52E6Q96RD3 313 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 DIRC2Q96SL1 478 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 CHIAQ9BZP6 476 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 PRDM13Q9H4Q3 707 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 RPS6KB2Q9UBS0 482 aa13.74□□□□□ -0.21
NECTIN1-202ENST00000340882 SLC22A31A6NKX4 558 aa13.73□□□□□ -0.21
NECTIN1-202ENST00000340882 SRRM5B3KS81 715 aa13.73□□□□□ -0.21
NECTIN1-202ENST00000340882 C11orf98E9PRG8 122 aa13.73□□□□□ -0.21
NECTIN1-202ENST00000340882 NDUFA7O95182 113 aa13.73□□□□□ -0.21
NECTIN1-202ENST00000340882 ADH4P08319 380 aa13.73□□□□□ -0.21
NECTIN1-202ENST00000340882 ALDOCP09972 364 aaKnown RBP13.73□□□□□ -0.21
NECTIN1-202ENST00000340882 NUDT7P0C024 238 aa13.73□□□□□ -0.21
NECTIN1-202ENST00000340882 AHCYP23526 432 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms