RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 NCBP2P52298 156 aaKnown RBP eCLIP8.9□□□□□ -0.985e-7■■■■□ 25.1
ATXN3-201ENST00000340660 ARF6P62330 175 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 RAB1AP62820 205 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 PMS2P3Q13401 168 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 CREB3L2Q70SY1 520 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 VMO1Q7Z5L0 202 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 GPR137CQ8N3F9 429 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 PNKDQ8N490 385 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 RORBQ92753 470 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 EXT2Q93063 718 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 ELP4Q96EB1 424 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 OTUB1Q96FW1 271 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-201ENST00000340660 PIF1Q9H611 641 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 MSL2Q9HCI7 577 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 C20orf141Q9NUB4 165 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 ACER3Q9NUN7 267 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 GIMAP4Q9NUV9 329 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 GLS2Q9UI32 602 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 SCOCQ9UIL1 159 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 SPIN1Q9Y657 262 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-201ENST00000340660 ZNF99A8MXY4 864 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-201ENST00000340660 NPFFO15130 113 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 RAD51CO43502 376 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 MFN2O95140 757 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 AKR7A3O95154 331 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 RAB36O95755 333 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 GYPCP04921 128 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 HCKP08631 526 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 STX2P32856 288 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 APOBEC1P41238 236 aaKnown RBP8.89□□□□□ -0.99
ATXN3-201ENST00000340660 TRA2BP62995 288 aaKnown RBP8.89□□□□□ -0.99
ATXN3-201ENST00000340660 IL5RAQ01344 420 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 SNX1Q13596 522 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 DUSP5Q16690 384 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 ZNF404Q494X3 552 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 IL23RQ5VWK5 629 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 GALNT7Q86SF2 657 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 EPHX4Q8IUS5 362 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 Q8N1X5 172 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 MMGT1Q8N4V1 131 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 C11orf42Q8N5U0 333 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 TEX9Q8N6V9 391 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 BEND2Q8NDZ0 799 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 C17orf50Q8WW18 174 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 C1orf54Q8WWF1 131 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 ZNF649Q9BS31 505 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 DERL2Q9GZP9 239 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 SIRT7Q9NRC8 400 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 B3GAT1Q9P2W7 334 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 ZDHHC8Q9ULC8 765 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 TFR2Q9UP52 801 aa8.89□□□□□ -0.99
ATXN3-201ENST00000340660 H3BNH8 94 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 ZNF264O43296 627 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 EIF4E2O60573 245 aaKnown RBP8.88□□□□□ -0.99
ATXN3-201ENST00000340660 LY86O95711 162 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 SERPINA5P05154 406 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 CCNA2P20248 432 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 SAA4P35542 130 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 CRATP43155 626 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 CLK1P49759 484 aaKnown RBP8.88□□□□□ -0.99
ATXN3-201ENST00000340660 P2RY4P51582 365 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 BMXP51813 675 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 CDH13P55290 713 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 UCP2P55851 309 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 SKP2Q13309 424 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 KIAA2026Q5HYC2 2103 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 KHDC1LQ5JSQ8 128 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 ZNF575Q86XF7 245 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 FGFBP3Q8TAT2 258 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 UBTD2Q8WUN7 234 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 SAMD8Q96LT4 415 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 AMDHD1Q96NU7 426 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 GLIPR2Q9H4G4 154 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 PPP1R3CQ9UQK1 317 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 ACOT9Q9Y305 439 aa8.88□□□□□ -0.99
ATXN3-201ENST00000340660 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 MEIOCA2RUB1 952 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 FBP2O00757 339 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 WISP3O95389 354 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-201ENST00000340660 PATE4P0C8F1 98 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 UBL4AP11441 157 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 CNTFRP26992 372 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 DLX1P56177 255 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 CAMK2DQ13557 499 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 CRYMQ14894 314 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 VPS26BQ4G0F5 336 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 SPATA46Q5T0L3 261 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 NOXRED1Q6NXP6 359 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 CELF2-AS1Q8N7Q2 184 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 SLC30A7Q8NEW0 376 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 TMEM234Q8WY98 164 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 GIMAP5Q96F15 307 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 P2RX4Q99571 388 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 ST6GALNAC5Q9BVH7 336 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 BCL2L14Q9BZR8 327 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 A4GALTQ9NPC4 353 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 REXO2Q9Y3B8 237 aaKnown RBP8.87□□□□□ -0.99
ATXN3-201ENST00000340660 LRP1BQ9NZR2 4599 aa8.87□□□□□ -0.99
ATXN3-201ENST00000340660 NPIPB9F8W1W9 429 aa8.86□□□□□ -0.99
ATXN3-201ENST00000340660 UGDHO60701 494 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms