RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 B4GALT1P15291 398 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 CBR1P16152 277 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 ZNF26P17031 533 aaPredicted RBP13.39□□□□□ -0.27
VAPA-201ENST00000340541 PAX7P23759 505 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 GPR4P46093 362 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 LIMS1P48059 325 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 DAP3P51398 398 aaKnown RBP13.39□□□□□ -0.27
VAPA-201ENST00000340541 ZNF133P52736 654 aaPredicted RBP13.39□□□□□ -0.27
VAPA-201ENST00000340541 MS4A2Q01362 244 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 ETFDHQ16134 617 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 C3orf36Q3SXR2 165 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 ALG10Q5BKT4 473 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 SLC22A25Q6T423 547 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 CYP2R1Q6VVX0 501 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 NOXO1Q8NFA2 376 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 OR51A7Q8NH64 312 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 SLC38A2Q96QD8 506 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 ZNF347Q96SE7 839 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 FOXB1Q99853 325 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 C1orf21Q9H246 121 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 TXNIPQ9H3M7 391 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 NOX3Q9HBY0 568 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 CENPBD1B2RD01 187 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 DHHO43323 396 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 TRMUO75648 421 aaKnown RBP13.38□□□□□ -0.27
VAPA-201ENST00000340541 PDE5AO76074 875 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 UBOX5O94941 541 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 IGHG1P01857 330 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 CELA3BP08861 270 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 CECR9P0C854 216 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 ACADSP16219 412 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 ITGA2P17301 1181 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 OMPP47874 163 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 SLC9A3P48764 834 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 TRIM25Q14258 630 aaKnown RBP13.38□□□□□ -0.27
VAPA-201ENST00000340541 ANKDD1AQ495B1 522 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 FGD3Q5JSP0 725 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 LCN8Q6JVE9 175 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 ZNF813Q6ZN06 617 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 OAFQ86UD1 273 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 DTX2Q86UW9 622 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 MDP1Q86V88 176 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 IGFN1Q86VF2 1251 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 PRIMA1Q86XR5 153 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 CCDC36Q8IYA8 594 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 OR4K5Q8NGD3 323 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 HDAC2Q92769 488 aaKnown RBP13.38□□□□□ -0.27
VAPA-201ENST00000340541 TRMT61AQ96FX7 289 aaKnown RBP13.38□□□□□ -0.27
VAPA-201ENST00000340541 FAM46AQ96IP4 442 aaKnown RBP13.38□□□□□ -0.27
VAPA-201ENST00000340541 ZNF75AQ96N20 296 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 TRAF4Q9BUZ4 470 aaPredicted RBP13.38□□□□□ -0.27
VAPA-201ENST00000340541 IL1RAPQ9NPH3 570 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 PRPF19Q9UMS4 504 aaKnown RBP13.38□□□□□ -0.27
VAPA-201ENST00000340541 MOKQ9UQ07 419 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 POFUT2Q9Y2G5 429 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 TLN2Q9Y4G6 2542 aa13.38□□□□□ -0.27
VAPA-201ENST00000340541 MCIDASD6RGH6 385 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 HLA-HP01893 362 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 FABP3P05413 133 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 QDPRP09417 244 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 ATP5J2P56134 94 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 CLRN1P58418 232 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 CTXN1P60606 82 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 NAAAQ02083 359 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 PIWIL3Q7Z3Z3 882 aaKnown RBP13.37□□□□□ -0.27
VAPA-201ENST00000340541 SYT14Q8NB59 555 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 OR52J3Q8NH60 311 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 ZNF519Q8TB69 540 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 MCHR2Q969V1 340 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 CLPTM1LQ96KA5 538 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 TSPAN32Q96QS1 320 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 KCNK17Q96T54 332 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 GPA33Q99795 319 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 DHRS9Q9BPW9 319 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 KATNB1Q9BVA0 655 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 GRIP2Q9C0E4 1043 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 MUC13Q9H3R2 512 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 MOV10Q9HCE1 1003 aaKnown RBP13.37□□□□□ -0.27
VAPA-201ENST00000340541 TMEM38BQ9NVV0 291 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 ZNF346Q9UL40 294 aaKnown RBP13.37□□□□□ -0.27
VAPA-201ENST00000340541 SIGLEC7Q9Y286 467 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 TMEM5Q9Y2B1 443 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 CSPG4Q6UVK1 2322 aa13.37□□□□□ -0.27
VAPA-201ENST00000340541 IGKV1D-43A0A0B4J1Z2 117 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 SH3PXD2BA1X283 911 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 PTP4A3O75365 173 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 PCSK6P29122 969 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 CALCRP30988 508 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 TTKP33981 857 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 ARR3P36575 388 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 MAGEA2P43356 314 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 IDH3GP51553 393 aaPredicted RBP13.36□□□□□ -0.27
VAPA-201ENST00000340541 FXYD6P3P58550 94 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 RPL27P61353 136 aaKnown RBP13.36□□□□□ -0.27
VAPA-201ENST00000340541 MYBPC1Q00872 1141 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 FMODQ06828 376 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 TOP3AQ13472 1001 aaPredicted RBP13.36□□□□□ -0.27
VAPA-201ENST00000340541 TAF11Q15544 211 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 ZBED5Q49AG3 693 aa13.36□□□□□ -0.27
VAPA-201ENST00000340541 MTX3Q5HYI7 312 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms