RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ADAM19Q9H013 955 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 TMEM185BQ9H7F4 350 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 FKRPQ9H9S5 495 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 BRF2Q9HAW0 419 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 LAMP5Q9UJQ1 280 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 SLC22A14Q9Y267 594 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 HS3ST2Q9Y278 367 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 A0A1W2PNU3 283 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TMEM72A0PK05 275 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 M0R3H8 397 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 FADS1O60427 444 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 KHDRBS3O75525 346 aaKnown RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PRG2P13727 222 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NME1P15531 152 aaKnown RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SLC2A5P22732 501 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 DGKAP23743 735 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 LMO1P25800 156 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 CD1CP29017 333 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RPIAP49247 311 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RAC1P63000 192 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 B4GALNT1Q00973 533 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 FOXO1Q12778 655 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OR8G1Q15617 311 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PNLIPRP3Q17RR3 467 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NSUN5P2Q63ZY6 315 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 HEPN1Q6WQI6 88 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ACOT7LQ6ZUV0 252 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 VRK3Q8IV63 474 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MMP21Q8N119 569 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OR1J4Q8NGS1 313 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OR2G2Q8NGZ5 317 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OR5J2Q8NH18 312 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NUDCD2Q8WVJ2 157 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PLD4Q96BZ4 506 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TMEM19Q96HH6 336 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SLC12A9Q9BXP2 914 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MYOZ1Q9NP98 299 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 GULP1Q9UBP9 304 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ICKQ9UPZ9 632 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TRBV23OR9-2A0A075B6M9 112 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TRBV6-7A0A0A0MS04 114 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TBC1D3BA6NDS4 549 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ACOD1A6NK06 481 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MFNGO00587 321 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 CTNSO60931 367 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MED6O75586 246 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SOD3P08294 240 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ANXA4P09525 319 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 EDN3P14138 238 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SEC13P55735 322 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 GMFBP60983 142 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 STXBP1P61764 594 aaKnown RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RAP1AP62834 184 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RPS26P62854 115 aaKnown RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MRPS11P82912 194 aaKnown RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 FUT5Q11128 374 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TSPAN31Q12999 210 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NR0B2Q15466 257 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TRIM40Q6P9F5 258 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 BTNL8Q6UX41 500 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 LINGO2Q7L985 606 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OVCH1Q7RTY7 1134 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ARHGEF39Q8N4T4 335 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OR4K14Q8NGD5 310 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 FIBINQ8TAL6 211 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PAQR8Q8TEZ7 354 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 LCN9Q8WX39 176 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ROBO4Q8WZ75 1007 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MRGPRFQ96AM1 343 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OTUB2Q96DC9 234 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 POM121Q96HA1 1249 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ART5Q96L15 291 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PIGQQ9BRB3 760 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RHOFQ9HBH0 211 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MED17Q9NVC6 651 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 CD84Q9UIB8 345 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ANGPT4Q9Y264 503 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MRPS18CQ9Y3D5 142 aaKnown RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 CBY1Q9Y3M2 126 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NUMA1Q14980 2115 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 METTL21EPA6NDL7 271 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RNASEK-C17orf49H0YIS7 233 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PGRMC2O15173 223 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OGG1O15527 345 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 BCHEP06276 602 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PDHA2P29803 388 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 P2RY2P41231 377 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ASMTP46597 345 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SLC6A9P48067 706 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ATP1B3P54709 279 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NAAAQ02083 359 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TOMM20Q15388 145 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 FAM71E1Q6IPT2 247 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NIPAL3Q6P499 406 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SERPINA9Q86WD7 417 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 YAF2Q8IY57 180 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 LRRC18Q8N456 261 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 DTWD2Q8NBA8 298 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PIGXQ8TBF5 258 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 FCAMRQ8WWV6 532 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms