RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 IGHG1P01857 330 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 H1F0P07305 194 aaKnown RBP13.25□□□□□ -0.29
PRKN-201ENST00000338468 QDPRP09417 244 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 ACADSP16219 412 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 RHCEP18577 417 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 GPR4P46093 362 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 DAP3P51398 398 aaKnown RBP13.25□□□□□ -0.29
PRKN-201ENST00000338468 IDH3GP51553 393 aaPredicted RBP13.25□□□□□ -0.29
PRKN-201ENST00000338468 ZNF133P52736 654 aaPredicted RBP13.25□□□□□ -0.29
PRKN-201ENST00000338468 ATP5J2P56134 94 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 DGCR6Q14129 220 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 SEC23BQ15437 767 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 SPATS1Q496A3 300 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 ALG10Q5BKT4 473 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 ZNF730Q6ZMV8 503 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 TMPRSS11FQ6ZWK6 438 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 CYP4Z1Q86W10 505 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 CCDC36Q8IYA8 594 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 DEPDC4Q8N2C3 294 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 CIARTQ8N365 385 aaPredicted RBP13.25□□□□□ -0.29
PRKN-201ENST00000338468 SYT14Q8NB59 555 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 NOXO1Q8NFA2 376 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 OR13C2Q8NGS9 318 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 FGFBP3Q8TAT2 258 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 HTRA1Q92743 480 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 HDAC2Q92769 488 aaKnown RBP13.25□□□□□ -0.29
PRKN-201ENST00000338468 MCHR2Q969V1 340 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 PYURFQ96I23 114 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 Q96MF0 132 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 TNFRSF13CQ96RJ3 184 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 NDE1Q9NXR1 346 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 TLN2Q9Y4G6 2542 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 STAB1Q9NY15 2570 aa13.25□□□□□ -0.29
PRKN-201ENST00000338468 ZANQ9Y493 2812 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 IGKV1D-43A0A0B4J1Z2 117 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 TRBV4-1A0A0J9YWV2 114 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 TRIM64A6NGJ6 449 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 TRIM64BA6NI03 449 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 EFCAB9A8MZ26 197 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 DHHO43323 396 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 GMNNO75496 209 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 IGHMP01871 453 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 SAGP10523 405 aaPredicted RBP13.24□□□□□ -0.29
PRKN-201ENST00000338468 ARR3P36575 388 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 LIMS1P48059 325 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 FABP6P51161 128 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 MNAT1P51948 309 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 MXRA7P84157 204 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 PPP2R2BQ00005 443 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 MYBPC1Q00872 1141 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 HGFACQ04756 655 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 MST1LQ2TV78 715 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 AGAP6Q5VW22 663 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 ZNF544Q6NX49 715 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 RINLQ6ZS11 566 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 CXXC5Q7LFL8 322 aaKnown RBP13.24□□□□□ -0.29
PRKN-201ENST00000338468 PIWIL3Q7Z3Z3 882 aaKnown RBP13.24□□□□□ -0.29
PRKN-201ENST00000338468 IGFN1Q86VF2 1251 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 SKA3Q8IX90 412 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 MUC15Q8N387 334 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 OR51A7Q8NH64 312 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 GTPBP3Q969Y2 492 aaKnown RBP13.24□□□□□ -0.29
PRKN-201ENST00000338468 NSMCE2Q96MF7 247 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 TXNIPQ9H3M7 391 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 MOV10Q9HCE1 1003 aaKnown RBP13.24□□□□□ -0.29
PRKN-201ENST00000338468 CBLN4Q9NTU7 201 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 FAIMQ9NVQ4 179 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 TMEM38BQ9NVV0 291 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 GDF2Q9UK05 429 aaPredicted RBP13.24□□□□□ -0.29
PRKN-201ENST00000338468 HIVEP2P31629 2446 aa13.24□□□□□ -0.29
PRKN-201ENST00000338468 ATRQ13535 2644 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 IGHV2OR16-5A0A0B4J2B6 119 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 CENPBD1B2RD01 187 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 MCIDASD6RGH6 385 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 H7C1Q1 480 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 IGHV4-39P01824 125 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 CRYAAP02489 173 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 PATE4P0C8F1 98 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 ZNF14P17017 642 aaPredicted RBP13.23□□□□□ -0.29
PRKN-201ENST00000338468 ATP6V1B2P21281 511 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 APOBEC3AP31941 199 aaPredicted RBP13.23□□□□□ -0.29
PRKN-201ENST00000338468 CAPZA2P47755 286 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 OMPP47874 163 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 CLRN1P58418 232 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 PIGFQ07326 219 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 NPRL3Q12980 569 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 TOP3AQ13472 1001 aaPredicted RBP13.23□□□□□ -0.29
PRKN-201ENST00000338468 GSG1Q2KHT4 349 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 OAFQ86UD1 273 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 FBXL14Q8N1E6 418 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 CLDN22Q8N7P3 220 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 MS4A3Q96HJ5 214 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 FAM46AQ96IP4 442 aaKnown RBP13.23□□□□□ -0.29
PRKN-201ENST00000338468 TSPAN32Q96QS1 320 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 ZNF346Q9UL40 294 aaKnown RBP13.23□□□□□ -0.29
PRKN-201ENST00000338468 FAM32AQ9Y421 112 aaKnown RBP13.23□□□□□ -0.29
PRKN-201ENST00000338468 UGT2A1Q9Y4X1 527 aa13.23□□□□□ -0.29
PRKN-201ENST00000338468 PTP4A3O75365 173 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 SLC2A10O95528 541 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms