RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SLC36A3Q495N2 470 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 PHYHD1Q5SRE7 291 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 C1QTNF12Q5T7M4 302 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 C9orf135Q5VTT2 229 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ANKRD16Q6P6B7 361 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 FAM122BQ7Z309 247 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ADCK1Q86TW2 530 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 JAZF1Q86VZ6 243 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 C1orf162Q8NEQ5 155 aaPredicted RBP10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 NOXO1Q8NFA2 376 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 LINC01560Q8TB33 94 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF519Q8TB69 540 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 FAM222BQ8WU58 562 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 HDAC2Q92769 488 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 MCHR2Q969V1 340 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 DACH2Q96NX9 599 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 WFIKKN1Q96NZ8 548 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ALKBH3Q96Q83 286 aaPredicted RBP10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 KCNK17Q96T54 332 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 MED18Q9BUE0 208 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 C9orf16Q9BUW7 83 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ACTR6Q9GZN1 396 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 DCLRE1BQ9H816 532 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 KRT84Q9NSB2 600 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ORC6Q9Y5N6 252 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 PCNX1Q96RV3 2341 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 SLC22A23A1A5C7 686 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 PRSS37A4D1T9 235 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 SH3D21A4FU49 640 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF99A8MXY4 864 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 MGRN1O60291 552 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 RAD51DO75771 328 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 IFNGP01579 166 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 IGFBP1P08833 259 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 EPXP11678 715 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 PAX7P23759 505 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 HOXC12P31275 282 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 CRISP1P54107 249 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 FOXG1P55316 489 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 SNTB1Q13884 538 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 GINS1Q14691 196 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 RCN1Q15293 331 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 TIMM23BQ5SRD1 257 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 SLC35F1Q5T1Q4 408 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 KDM4DQ6B0I6 523 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 SLC27A4Q6P1M0 643 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 KLHL24Q6TFL4 600 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 ZBTB49Q6ZSB9 765 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 LINGO2Q7L985 606 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 WDFY1Q8IWB7 410 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 CCDC36Q8IYA8 594 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 PARP8Q8N3A8 854 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 LNX2Q8N448 690 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 C17orf78Q8N4C9 275 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 OR1K1Q8NGR3 316 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 OR4K13Q8NH42 304 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 BCL2L2Q92843 193 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 EME1Q96AY2 570 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 S100PBPQ96BU1 408 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 RASD2Q96D21 266 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 SNX18Q96RF0 628 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 CIB1Q99828 191 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 NGBQ9NPG2 151 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF226Q9NYT6 803 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 KLHL21Q9UJP4 597 aa10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 SPENQ96T58 3664 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-202ENST00000337841 OR5H1A6NKK0 313 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 BHLHE40O14503 412 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 KHDRBS3O75525 346 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 FARS2O95363 451 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 WNT11O96014 354 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 TP53P04637 393 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 HIST1H1CP16403 213 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 IGFBP2P18065 325 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 IGFBP5P24593 272 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 CRABP1P29762 137 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 GRK5P34947 590 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 CDKN2AP42771 156 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF133P52736 654 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 RAD23AP54725 363 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 UBE2NP61088 152 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 DAG1Q14118 895 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 MESTQ5EB52 335 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 C10orf128Q5T292 105 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 DNM1P34Q6PK57 102 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 SLC25A47Q6Q0C1 308 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF813Q6ZN06 617 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 ACBD4Q8NC06 268 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 OR52E2Q8NGJ4 325 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 OR8D4Q8NGM9 314 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 NSMAFQ92636 917 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 BOD1Q96IK1 185 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 FOXB1Q99853 325 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 PLA2G12AQ9BZM1 189 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 KCNN2Q9H2S1 579 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 OBP2BQ9NPH6 170 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 SLC17A5Q9NRA2 495 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 VSX1Q9NZR4 365 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 KCNN3Q9UGI6 736 aa10.46□□□□□ -0.73
SPTLC1-202ENST00000337841 AMDHD2Q9Y303 409 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms