RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 C20orf85Q9H1P6 137 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 ADGRL4Q9HBW9 690 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 FGF21Q9NSA1 209 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 CUTCQ9NTM9 273 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 FBXO4Q9UKT5 387 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 ZNF337Q9Y3M9 751 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 ABCA1O95477 2261 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 FRYLO94915 3013 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 COL6A3P12111 3177 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 RAB19A4D1S5 217 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 KCNJ13O60928 360 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 AKR7A3O95154 331 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 S100A9P06702 114 aaKnown RBP7.5□□□□□ -1.21
HPS4-201ENST00000336873 HEXBP07686 556 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 SFTPBP07988 381 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 OR2T7P0C7T2 308 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 PRSS3P35030 304 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 LIMK1P53667 647 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 RAB38P57729 211 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 CXADRP78310 365 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 TAGLNQ01995 201 aaKnown RBP7.5□□□□□ -1.21
HPS4-201ENST00000336873 RSPO4Q2I0M5 234 aaPredicted RBP7.5□□□□□ -1.21
HPS4-201ENST00000336873 PRICKLE4Q2TBC4 344 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 ZNF628Q5EBL2 1059 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 LIX1LQ8IVB5 337 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 TMEM156Q8N614 296 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 ZNF283Q8N7M2 679 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 OR2T27Q8NH04 317 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 GPR148Q8TDV2 347 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 CMBLQ96DG6 245 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 ARHGDIGQ99819 225 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 ST6GALNAC5Q9BVH7 336 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 ZNF350Q9GZX5 532 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 OR51B6Q9H340 312 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 NRIP3Q9NQ35 241 aa7.5□□□□□ -1.21
HPS4-201ENST00000336873 F5H0A9 414 aaPredicted RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 SLC43A1O75387 559 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 PPM1BO75688 479 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 IGHV3-9P01782 118 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ANKRD34CP0C6C1 535 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF35P13682 527 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF250P15622 560 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF20P17024 532 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 OR3A2P47893 321 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 AGFG1P52594 562 aaKnown RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 RIDAP52758 137 aaKnown RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF85Q03923 595 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 HTR4Q13639 388 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 CDK5R1Q15078 307 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ST3GAL2Q16842 350 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 LINC00303Q3SY05 128 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 CDONQ4KMG0 1287 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 RPL13AP3Q6NVV1 102 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 UNQ6126/PRO20091Q6UXV3 157 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 GKN2Q86XP6 184 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 LINC00469Q8N7U9 141 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF417Q8TAU3 575 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF587Q96SQ5 575 aaPredicted RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 RANBP3Q9H6Z4 567 aaPredicted RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 METTL8Q9H825 291 aaKnown RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 UBQLN2Q9UHD9 624 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 PFDN2Q9UHV9 154 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 OR2AT4A6NND4 320 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF749O43361 778 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF205O95201 554 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 RAB3DO95716 219 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 CD14P08571 375 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 NR0B2Q15466 257 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 GAB4Q2WGN9 574 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 SFRP5Q5T4F7 317 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZCCHC12Q6PEW1 402 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ABHD12BQ7Z5M8 362 aaPredicted RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 BEST3Q8N1M1 668 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 FAM109AQ8N4B1 249 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 OR2AJ1Q8NGZ0 328 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 GIMAP5Q96F15 307 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 SIGLEC11Q96RL6 698 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 LPAR4Q99677 370 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 PRSS27Q9BQR3 290 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 BANF2Q9H503 90 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 CTSFQ9UBX1 484 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 SUSD2Q9UGT4 822 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 MRPS17Q9Y2R5 130 aaKnown RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 LOC105371267A0A1B0GV96 52 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 SERTM1A2A2V5 107 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 FAM221BA6H8Z2 402 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF726A6NNF4 738 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF432O94892 652 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 UBL3O95164 117 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ECDO95905 644 aaPredicted RBP7.49□□□□□ -1.21
HPS4-201ENST00000336873 CD3DP04234 171 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ATP1B1P05026 303 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ZNF806P0C7X5 589 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 C21orf58P58505 322 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 PRPS1P60891 318 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 HNF4GQ14541 408 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 COL19A1Q14993 1142 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 ACKR1Q16570 336 aa7.49□□□□□ -1.21
HPS4-201ENST00000336873 FAM199XQ6PEV8 388 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms