RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 NUP50Q9UKX7 468 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MOKQ9UQ07 419 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 HIF3AQ9Y2N7 669 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 KIR2DS5A0A0G2JLQ3 304 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 A0A0G2JNG1 304 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 NAP1L6A6NFF2 107 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 OR5K4A6NMS3 321 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MCRIP1C9JLW8 97 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 KIR2DS3K7RE56 304 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 LGALS8O00214 317 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 SUSD5O60279 629 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 RAB40ALP0C0E4 278 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 CALCBP10092 127 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 ZNF35P13682 527 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 SDHAP31040 664 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 KIR3DL2P43630 455 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 CENPAP49450 140 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 CCR5P51681 352 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 KIR2DS5Q14953 304 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 TOMM34Q15785 309 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 KLHL26Q53HC5 615 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 NHLRC3Q5JS37 347 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 OR7E24Q6IFN5 339 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 SLC43A2Q8N370 569 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 ZNF615Q8N8J6 731 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 C19orf47Q8N9M1 422 aaKnown RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 RAB40AQ8WXH6 277 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 PHYHIPQ92561 330 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 TAAR8Q969N4 342 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MAP3K3Q99759 626 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MS4A7Q9GZW8 240 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 GRHPRQ9UBQ7 328 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 SLC22A13Q9Y226 551 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 TMEM131Q92545 1883 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 FXYD6-FXYD2A0A087WZ82 144 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 TRBV5-5A0A0J9YX44 114 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 CLPSP04118 112 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 ITGA5P08648 1049 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 TACSTD2P09758 323 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 HPGDP15428 266 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 EIF2B5Q13144 721 aaKnown RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MANEAQ5SRI9 462 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MDGA2Q7Z553 956 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 SPICQ8N5J4 248 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 OR51S1Q8NGJ8 323 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 STK35Q8TDR2 534 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MRPL48Q96GC5 212 aaKnown RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 RADILQ96JH8 1075 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 GPX7Q96SL4 187 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 FXYD6Q9H0Q3 95 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 SLC6A5Q9Y345 797 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 TRAV18A0A075B6X5 111 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 SPTY2D1-AS1A0A0U1RR47 76 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 TEX51A0A1B0GUA7 166 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 FAM221BA6H8Z2 402 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 CHURC1-FNTBB4DL54 471 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 WNT11O96014 354 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 GIPP09681 153 aaPredicted RBP11.15□□□□□ -0.62
VPS33B-201ENST00000333371 ASAH2BP0C7U1 165 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 CSRP1P21291 193 aaKnown RBP11.15□□□□□ -0.62
VPS33B-201ENST00000333371 SKP2Q13309 424 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 IL10RAQ13651 578 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 WDR38Q5JTN6 314 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 SLC6A19Q695T7 634 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 MUC20Q8N307 709 aaPredicted RBP11.15□□□□□ -0.62
VPS33B-201ENST00000333371 SPERTQ8NA61 448 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 PLPP7Q8NBV4 271 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 REG4Q9BYZ8 158 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 NXF5Q9H1B4 397 aaKnown RBP11.15□□□□□ -0.62
VPS33B-201ENST00000333371 SEMA6CQ9H3T2 930 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 ZNF275Q9NSD4 429 aaPredicted RBP11.15□□□□□ -0.62
VPS33B-201ENST00000333371 EMC3Q9P0I2 261 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 FBXL3Q9UKT7 428 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 RTTNQ86VV8 2226 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 MED12Q93074 2177 aa11.15□□□□□ -0.62
VPS33B-201ENST00000333371 TCRBV16S1A1N1A0A5B0 115 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 GOSR2O14653 212 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 SULT1B1O43704 296 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 RBBP9O75884 186 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 TACR3P29371 465 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 CCKBRP32239 447 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 POU3F4P49335 361 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 SQSTM1Q13501 440 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 FZD2Q14332 565 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 HLXQ14774 488 aaPredicted RBP11.15□□□□□ -0.63
VPS33B-201ENST00000333371 ETFDHQ16134 617 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 WBP2NLQ6ICG8 309 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 ASPHD2Q6ICH7 369 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 SLC36A1Q7Z2H8 476 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF563Q8TA94 476 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 TSEN15Q8WW01 171 aaKnown RBP11.15□□□□□ -0.63
VPS33B-201ENST00000333371 RLN3Q8WXF3 142 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 KLHDC7BQ96G42 594 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 ADOQ96SZ5 270 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 PNO1Q9NRX1 252 aaKnown RBP11.15□□□□□ -0.63
VPS33B-201ENST00000333371 SDHAF2Q9NX18 166 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 KCNMB2Q9Y691 235 aa11.15□□□□□ -0.63
VPS33B-201ENST00000333371 TMEM272A0A1B0GTI8 110 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms