RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 MRPL15Q9P015 296 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 SUSD2Q9UGT4 822 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 TMEM14AQ9Y6G1 99 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 EXPH5Q8NEV8 1989 aa13.4□□□□□ -0.26
CLCNKA-201ENST00000331433 CPAMD8Q8IZJ3 1885 aa13.4□□□□□ -0.27
CLCNKA-201ENST00000331433 LY6G6EA0A0G2JKS1 128 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 PLPP3O14495 311 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 TRIM3O75382 744 aaPredicted RBP13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 SCRG1O75711 98 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 AHSA1O95433 338 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 MAS1P04201 325 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 BTG1P62324 171 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 CCL7P80098 99 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 MEP1BQ16820 701 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 LYSMD4Q5XG99 296 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 RABEPKQ7Z6M1 372 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 SMIM4Q8WVI0 70 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 TMEM106AQ96A25 262 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 TXNIPQ9H3M7 391 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 ELOVL3Q9HB03 270 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 MRPL22Q9NWU5 206 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 OR5V1Q9UGF6 321 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 VDAC3Q9Y277 283 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 FKBP7Q9Y680 259 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 U3KQA8 63 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 IGLV3-12A0A075B6K2 115 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 TRABD2BA6NFA1 517 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 H0YC42 278 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 RAD1O60671 282 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 TCRBP04435 133 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 SPARCP09486 303 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 MAPK3P27361 379 aaPredicted RBP13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 GDNFP39905 211 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 KIR3DL2P43630 455 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 RGS19P49795 217 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 SLC26A5P58743 744 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 RPS15P62841 145 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 ACY1Q03154 408 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 ASCC1Q8N9N2 400 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 ARL5BQ96KC2 179 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 MNTQ99583 582 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 SLITRK2Q9H156 845 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 ING3Q9NXR8 418 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 MED11Q9P086 117 aa13.39□□□□□ -0.27
CLCNKA-201ENST00000331433 IGLV1-36A0A0B4J1U3 117 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 TRBV11-1A0A0K0K1C0 115 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 TOX3O15405 576 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 SIGLEC6O43699 453 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 ALOX12BO75342 701 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 PTHLHP12272 177 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 KLF9Q13886 244 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 WDR38Q5JTN6 314 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 PAPD4Q6PIY7 484 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 ARSKQ6UWY0 536 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 BAIAP2L2Q6UXY1 529 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 LRRTM1Q86UE6 522 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 TMPRSS12Q86WS5 348 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 SYNPRQ8TBG9 265 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 C8orf44Q96CB5 159 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 C4orf45Q96LM5 186 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 CACNG6Q9BXT2 260 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 COMMD4Q9H0A8 199 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 HRH3Q9Y5N1 445 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 KIF26BQ2KJY2 2108 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 SLC22A23A1A5C7 686 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 TMEM200CA6NKL6 621 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 SHISA8B8ZZ34 492 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 GSTZ1O43708 216 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 ZNF254O75437 659 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 WNT11O96014 354 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 TIGD3Q6B0B8 471 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 PPP1R14AQ96A00 147 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 CMTM3Q96MX0 182 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 VSX1Q9NZR4 365 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 GTF2A1LQ9UNN4 478 aa13.38□□□□□ -0.27
CLCNKA-201ENST00000331433 IGHV5-10-1A0A0J9YXX1 117 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 TMEM212A6NML5 194 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 FTCDNL1E5RQL4 147 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 CTDSPLO15194 276 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 MPZL1O95297 269 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 ADAM8P78325 824 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 FAPQ12884 760 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 NR0B2Q15466 257 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 FCN2Q15485 313 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 FAM69BQ5VUD6 431 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 LCN10Q6JVE6 187 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 MDGA2Q7Z553 956 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 OR52I2Q8NH67 350 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 STK35Q8TDR2 534 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 GPR148Q8TDV2 347 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 DCBLD2Q96PD2 775 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 OR8B4Q96RC9 309 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 WDR77Q9BQA1 342 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 APMAPQ9HDC9 416 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 SLC22A13Q9Y226 551 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 NUBP2Q9Y5Y2 271 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 RALGAPA1Q6GYQ0 2036 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 TRBV5-7A0A0A0MS05 114 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 ANXA2P2A6NMY6 339 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 PHYHO14832 338 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms