RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ERP29P30040 261 aaKnown RBP14.35□□□□□ -0.11
PDGFB-201ENST00000331163 MAP2K3P46734 347 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 OMPP47874 163 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 OR1C1Q15619 314 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 HYAL4Q2M3T9 481 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 VASNQ6EMK4 673 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 MRPL14Q6P1L8 145 aaKnown RBP14.35□□□□□ -0.11
PDGFB-201ENST00000331163 KRT74Q7RTS7 529 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.35□□□□□ -0.11
PDGFB-201ENST00000331163 PITX2Q99697 317 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 OR51B6Q9H340 312 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 MRPS7Q9Y2R9 242 aaKnown RBP14.35□□□□□ -0.11
PDGFB-201ENST00000331163 WIF1Q9Y5W5 379 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 NPIPA2E9PIF3 369 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 NPIPA3F8WFD2 350 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 NUPL2O15504 423 aaKnown RBP14.35□□□□□ -0.11
PDGFB-201ENST00000331163 SSTR2P30874 369 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 SYT14P1Q58G82 188 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 DDI2Q5TDH0 399 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 PLAG1Q6DJT9 500 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 CORO6Q6QEF8 472 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 ARHGEF39Q8N4T4 335 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 SCNM1Q9BWG6 230 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 NPAP1Q9NZP6 1156 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 B4E171 279 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 TNFSF11O14788 317 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 TOXO94900 526 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 HLA-DOBP13765 273 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 POU3F2P20265 443 aaPredicted RBP14.35□□□□□ -0.11
PDGFB-201ENST00000331163 TSPAN7P41732 249 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 PSPHP78330 225 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 LGALS3BPQ08380 585 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 IQCF2Q8IXL9 164 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 OR5M9Q8NGP3 310 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 FER1L6-AS2Q96M78 137 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 MYO18BQ8IUG5 2567 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 ANKRD61A6NGH8 418 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 CD8B2A6NJW9 211 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 ALG1L2C9J202 215 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 CD8BP10966 210 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF823P16415 610 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 SLC6A8P48029 635 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 POLR2HP52434 150 aaKnown RBP14.34□□□□□ -0.11
PDGFB-201ENST00000331163 BIDP55957 195 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 PER3P56645 1201 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 SKP2Q13309 424 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 P2RY14Q15391 338 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 LRRC18Q8N456 261 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 TMEM80Q96HE8 168 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 SLC6A9P48067 706 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 FMODQ06828 376 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 DPY19L4Q7Z388 723 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF582Q96NG8 517 aaPredicted RBP14.34□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF337Q9Y3M9 751 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 A3GALT2U3KPV4 340 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 CXCL13O43927 109 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 SELENOFO60613 162 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF883P0CG24 379 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF250P15622 560 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 FPR3P25089 353 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDGFB-201ENST00000331163 EIF3IQ13347 325 aaKnown RBP14.34□□□□□ -0.11
PDGFB-201ENST00000331163 ETFDHQ16134 617 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 TOR2AQ5JU69 321 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 FAM205BPQ63HN1 556 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 LRFN4Q6PJG9 635 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 RASSF6Q6ZTQ3 369 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 PLCZ1Q86YW0 608 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF524Q96C55 264 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 PRSS27Q9BQR3 290 aa14.34□□□□□ -0.11
PDGFB-201ENST00000331163 NXF2Q9GZY0 626 aaKnown RBP14.34□□□□□ -0.11
PDGFB-201ENST00000331163 NOTCH2Q04721 2471 aa14.33□□□□□ -0.11
PDGFB-201ENST00000331163 TEX46H3BTG2 121 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 HPGDSO60760 199 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 MSL3P1P0C860 447 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 CLRN1P58418 232 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 GRINAQ7Z429 371 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.33□□□□□ -0.12
PDGFB-201ENST00000331163 ATCAYQ86WG3 371 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 PHC2Q8IXK0 858 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 NKD1Q969G9 470 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 DDIT4LQ96D03 193 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 RNF170Q96K19 258 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 SIGLEC11Q96RL6 698 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 A0A087WUJ7 227 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 TMEM72A0PK05 275 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 MPZL2O60487 215 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 CD96P40200 585 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 CLDN17P56750 224 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 IGLV3-21P80748 117 aaPredicted RBP14.33□□□□□ -0.12
PDGFB-201ENST00000331163 ZNF141Q15928 474 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 ZPLD1Q8TCW7 415 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 NKX3-1Q99801 234 aaPredicted RBP14.33□□□□□ -0.12
PDGFB-201ENST00000331163 SLC6A15Q9H2J7 730 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 C12orf49Q9H741 205 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 CSAG2Q9Y5P2 127 aa14.33□□□□□ -0.12
PDGFB-201ENST00000331163 ZAR1LA6NP61 321 aa14.32□□□□□ -0.12
PDGFB-201ENST00000331163 H3BMH7 237 aa14.32□□□□□ -0.12
PDGFB-201ENST00000331163 ITGB2P05107 769 aa14.32□□□□□ -0.12
PDGFB-201ENST00000331163 GZMKP49863 264 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms