RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 NKPD1Q17RQ9 610 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 GGNBP1Q5YKI7 109 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 GRHL2Q6ISB3 625 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF529Q6P280 563 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 TMPPEQ6ZT21 453 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 PAQR4Q8N4S7 273 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-201ENST00000328923 LINC00471Q8N535 108 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 HSD17B11Q8NBQ5 300 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 SLC30A7Q8NEW0 376 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 BBS1Q8NFJ9 593 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 ABHD4Q8TB40 342 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 SLC7A13Q8TCU3 470 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 PPP1R1CQ8WVI7 109 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 PTCHD1Q96NR3 888 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 HIST1H2BLQ99880 126 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 WRAP53Q9BUR4 548 aaKnown RBP10.82□□□□□ -0.68
SHMT2-201ENST00000328923 RAB33BQ9H082 229 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 OR51V1Q9H2C8 321 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 CALML5Q9NZT1 146 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 COMMD9Q9P000 198 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 SHPKQ9UHJ6 478 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 A0A087WUJ7 227 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 ELOA3CA0A087WX78 387 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 A0A1W2PPQ1 181 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 DCTN6O00399 190 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 OGG1O15527 345 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 TGOLN2O43493 480 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 FBXO24O75426 580 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 H1F0P07305 194 aaKnown RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 FCGR3AP08637 254 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 CD22P20273 847 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 MMP11P24347 488 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 LPAR6P43657 344 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 PFN3P60673 137 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 SKP1P63208 163 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 PDE7AQ13946 482 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 JOSD1Q15040 202 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 CTXN3Q4LDR2 81 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 C1orf185Q5T7R7 199 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 KHDRBS2Q5VWX1 349 aaKnown RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 FAM83HQ6ZRV2 1179 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 LRRC56Q8IYG6 542 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 ASB13Q8WXK3 278 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 DERL3Q96Q80 235 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 GPR62Q9BZJ7 368 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 ATG5Q9H1Y0 275 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 SEMA5BQ9P283 1151 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 RPH3ALQ9UNE2 315 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 COLQQ9Y215 455 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 HDGFL3Q9Y3E1 203 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 LOC100509620A0A075B734 347 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 HCRTR2O43614 444 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 GPR37L1O60883 481 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 OR2C1O95371 312 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 CH25HO95992 272 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 MBPP02686 304 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 SPARCP09486 303 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF888P0CJ79 500 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 CCL5P13501 91 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 MAS1LP35410 378 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 OR3A1P47881 315 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 RPS23P62266 143 aaKnown RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 BTG2P78543 158 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 ARF5P84085 180 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 MRPL58Q14197 206 aaKnown RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF385BQ569K4 471 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 REEP3Q6NUK4 255 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF774Q6NX45 483 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 SIRT6Q8N6T7 355 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 FRMD1Q8N878 549 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 INO80EQ8NBZ0 244 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 SMPDL3BQ92485 455 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 SPACA7Q96KW9 195 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 FAM83CQ9BQN1 747 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 LMAN1LQ9HAT1 526 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 HCSTQ9UBK5 93 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 AK6Q9Y3D8 172 aaKnown RBP10.81□□□□□ -0.68
SHMT2-201ENST00000328923 FLVCR1Q9Y5Y0 555 aa10.81□□□□□ -0.68
SHMT2-201ENST00000328923 A0A087WZY1 265 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 F8VVB4 439 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 F8VWA3 439 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ADAP1O75689 374 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 CD160O95971 181 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 IGHA1P01876 353 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ACP5P13686 325 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 PGAM2P15259 253 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ACVR1BP36896 505 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 PNLIPRP1P54315 467 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF763Q0D2J5 394 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 TAF10Q12962 218 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 TCTN1Q2MV58 587 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 CLEC12AQ5QGZ9 265 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 TNFAIP8L2Q6P589 184 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-201ENST00000328923 TMEM220Q6QAJ8 160 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 WDR88Q6ZMY6 472 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 KLHDC8AQ8IYD2 350 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 TTC9BQ8N6N2 239 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 C17orf47Q8NEP4 570 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 OR4C16Q8NGL9 310 aa10.8□□□□□ -0.68
SHMT2-201ENST00000328923 OR5W2Q8NH69 310 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms