RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 RNF141Q8WVD5 230 aa11.62□□□□□ -0.55
CCDC60-201ENST00000327554 ZBTB8AQ96BR9 441 aa11.62□□□□□ -0.55
CCDC60-201ENST00000327554 SEH1LQ96EE3 360 aa11.62□□□□□ -0.55
CCDC60-201ENST00000327554 SLC46A2Q9BY10 475 aa11.62□□□□□ -0.55
CCDC60-201ENST00000327554 A0A1W2PRU2 124 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 LRRC72A6NJI9 287 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 HOXA2O43364 376 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 LDB3O75112 727 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 SOD2P04179 222 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 LIPCP11150 499 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 TPT1P13693 172 aaKnown RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 MUC1P15941 1255 aaPredicted RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 CFPP27918 469 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 SDHAP31040 664 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 PRKXP51817 358 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 DPTQ07507 201 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 PRAMEF17Q5VTA0 474 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 TMEM205Q6UW68 189 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 DBX2Q6ZNG2 339 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 ZNF595Q8IYB9 648 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 C15orf54Q8N8G6 183 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 FBXO17Q96EF6 278 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 CPNE2Q96FN4 548 aaPredicted RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 PTCHD1Q96NR3 888 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 SEMA6CQ9H3T2 930 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 PLEKHA6Q9Y2H5 1048 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 SLC22A7Q9Y694 548 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 FAM171A2A8MVW0 826 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 ZNF705EA8MWA4 302 aaPredicted RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 ABHD16AO95870 558 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 ITGA5P08648 1049 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 PRF1P14222 555 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 ZBTB25P24278 435 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 DDX6P26196 483 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 PPT1P50897 306 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 RBM39Q14498 530 aaKnown RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 PRRT3Q5FWE3 981 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 NKAPLQ5M9Q1 402 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 SLC39A5Q6ZMH5 540 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 TMEM151BQ8IW70 566 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 BAP18Q8IXM2 172 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 OR51A4Q8NGJ6 313 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 ZNF417Q8TAU3 575 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 DOK4Q8TEW6 326 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 TMED6Q8WW62 240 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 HIST1H2BAQ96A08 127 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 RBM18Q96H35 190 aaKnown RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 PAPOLGQ9BWT3 736 aaKnown RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 SELENOIQ9C0D9 397 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 CYTL1Q9NRR1 136 aa11.61□□□□□ -0.55
CCDC60-201ENST00000327554 METTL1Q9UBP6 276 aaKnown RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 ZNF346Q9UL40 294 aaKnown RBP11.61□□□□□ -0.55
CCDC60-201ENST00000327554 TEX13DA0A0J9YY54 714 aaPredicted RBP11.6□□□□□ -0.55
CCDC60-201ENST00000327554 OR4C45A6NMZ5 311 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 GLCEO94923 617 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 CD14P08571 375 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 FBP1P09467 338 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 PGAM2P15259 253 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 SNRPNP63162 240 aaKnown RBP11.6□□□□□ -0.55
CCDC60-201ENST00000327554 NAAAQ02083 359 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 PRKCZQ05513 592 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 FABP9Q0Z7S8 132 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 HYAL4Q2M3T9 481 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 C2orf76Q3KRA6 126 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 ACER2Q5QJU3 275 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 EXOSC6Q5RKV6 272 aaKnown RBP11.6□□□□□ -0.55
CCDC60-201ENST00000327554 ARHGAP40Q5TG30 622 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 ABHD13Q7L211 337 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 TMEM200AQ86VY9 491 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 JAZF1Q86VZ6 243 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 ZNF511Q8NB15 262 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 OR10R2Q8NGX6 335 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 TMEM106AQ96A25 262 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 RASD2Q96D21 266 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 TCEAL7Q9BRU2 100 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 SMCO4Q9NRQ5 59 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 CDV3Q9UKY7 258 aaKnown RBP11.6□□□□□ -0.55
CCDC60-201ENST00000327554 VSIG4Q9Y279 399 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 SCN5AQ14524 2016 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 TMEM72A0PK05 275 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 H3BSH0 61 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 ZNF208O43345 1280 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 CDC40O60508 579 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC60-201ENST00000327554 AK1P00568 194 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 TACSTD2P09758 323 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 AGAP20933 346 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 RBM34P42696 430 aaKnown RBP11.6□□□□□ -0.55
CCDC60-201ENST00000327554 HGFACQ04756 655 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 MLF2Q15773 248 aaPredicted RBP11.6□□□□□ -0.55
CCDC60-201ENST00000327554 TRMT12Q53H54 448 aaKnown RBP11.6□□□□□ -0.55
CCDC60-201ENST00000327554 CORO6Q6QEF8 472 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 FAM220AQ7Z4H9 259 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 OR4N5Q8IXE1 308 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 IRF7Q92985 503 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 C14orf79Q96F83 325 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 SLC6A7Q99884 636 aa11.6□□□□□ -0.55
CCDC60-201ENST00000327554 NAA11Q9BSU3 229 aaPredicted RBP11.6□□□□□ -0.55
CCDC60-201ENST00000327554 RHOFQ9HBH0 211 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms