RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ELSPBP1Q96BH3 223 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 CTHRC1Q96CG8 243 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 HAVCR1Q96D42 359 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 AMELYQ99218 206 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 GFI1Q99684 422 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 DHDHQ9UQ10 334 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 NOP16Q9Y3C1 178 aaKnown RBP11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 EYSQ5T1H1 3165 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 SDHAP31040 664 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 RABIFP47224 123 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 ARHGDIBP52566 201 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 TOMM34Q15785 309 aaPredicted RBP11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 RAB11BQ15907 218 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 DEFB133Q30KQ1 61 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 GPR139Q6DWJ6 353 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 MDGA2Q7Z553 956 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 SLC22A18ASQ8N1D0 253 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 RBPMSQ93062 196 aaKnown RBP11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 C5orf34Q96MH7 638 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 OR11A1Q9GZK7 315 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 PTTG3PQ9NZH4 202 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 DOCK8Q8NF50 2099 aa11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 NUP210Q8TEM1 1887 aaPredicted RBP11.71□□□□□ -0.54
HMGCS1-201ENST00000325110 PNMTP11086 282 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 SHHQ15465 462 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 ETFDHQ16134 617 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 SLC35D3Q5M8T2 416 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 B3GNTL1Q67FW5 361 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 CD163Q86VB7 1156 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 ANGPTL6Q8NI99 470 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF417Q8TAU3 575 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 MIB2Q96AX9 1013 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 MMP25Q9NPA2 562 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 C12orf4Q9NQ89 552 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 KCNN3Q9UGI6 736 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 POMT2Q9UKY4 750 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 A0A1B0GUH1 482 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 FITM1A5D6W6 292 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 ARPC3O15145 178 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 APOC3P02656 99 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 VAMP1P23763 118 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 DLX5P56178 289 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 RAP2BP61225 183 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 PLCXD2Q0VAA5 305 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 GLDNQ6ZMI3 551 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 C17orf107Q6ZR85 190 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 LINC00346Q8IVM7 164 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 RELL2Q8NC24 303 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 SEC22AQ96IW7 307 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 CD207Q9UJ71 328 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 SLCO1B1Q9Y6L6 691 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 A6NCN8 305 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 OR5K4A6NMS3 321 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 B8ZZF3 427 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 F5H5P2 479 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 TNFRSF10CO14798 259 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 ICOSLGO75144 302 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 IFNGR1P15260 489 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 S1PR1P21453 382 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 STARP49675 285 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 RBMS2Q15434 407 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 TAF13Q15543 124 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 NSDHLQ15738 373 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 Q6ZS52 159 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF595Q8IYB9 648 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 CXorf58Q96LI9 332 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 LMF2Q9BU23 707 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 PTDSS2Q9BVG9 487 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 PCOLCE2Q9UKZ9 415 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 KIF26BQ2KJY2 2108 aa11.7□□□□□ -0.54
HMGCS1-201ENST00000325110 EPOPA6NHQ4 379 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 PRR19A6NJB7 356 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 PRAMEF26H0Y7S4 382 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 CCSO14618 274 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 GP1BBP13224 206 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF28P17035 718 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 GABRG2P18507 467 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 CXCL2P19875 107 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 WDR38Q5JTN6 314 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ELP2Q6IA86 826 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ACBD4Q8NC06 268 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 TAAR8Q969N4 342 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 CCDC74AQ96AQ1 378 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 SLC25A44Q96H78 314 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 TSPAN32Q96QS1 320 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 GABRG3Q99928 467 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 MFFQ9GZY8 342 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 HEXA-AS1Q9H8Q6 139 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 SCML1Q9UN30 329 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 TMEM14AQ9Y6G1 99 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 FOXS1O43638 330 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 RAB3DO95716 219 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ACSM4P0C7M7 580 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF823P16415 610 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 CD1CP29017 333 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ARRB1P49407 418 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms