RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TSPAN5P62079 268 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 GUCA2AQ02747 115 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 PLCXD2Q0VAA5 305 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 ZNF782Q6ZMW2 699 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-201ENST00000320755 LRRTM1Q86UE6 522 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 GPR148Q8TDV2 347 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-201ENST00000320755 CLEC4MQ9H2X3 399 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-201ENST00000320755 ASCC3Q8N3C0 2202 aaKnown RBP15.75■□□□□ 0.11
COL9A1-201ENST00000320755 KIF26BQ2KJY2 2108 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 IGHV3-20A0A0C4DH32 117 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 LEUTXA8MZ59 168 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 RLN1P04808 185 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 ALDOBP05062 364 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 RAB40ALP0C0E4 278 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 LCN1P31025 176 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 ACKR1Q16570 336 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 PCGF3Q3KNV8 242 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 WDR38Q5JTN6 314 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 OR8S1Q8NH09 359 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 ZNF721Q8TF20 911 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 RAB40AQ8WXH6 277 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 PMEPA1Q969W9 287 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 ADIPOR1Q96A54 375 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 NXPE2Q96DL1 559 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 CA10Q9NS85 328 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 MRPL39Q9NYK5 338 aaKnown RBP15.75■□□□□ 0.11
COL9A1-201ENST00000320755 SCP2D1Q9UJQ7 156 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 MKL2Q9ULH7 1088 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 MED12Q93074 2177 aa15.75■□□□□ 0.11
COL9A1-201ENST00000320755 IGHV1OR15-9A0A0B4J2B8 117 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 A0A1B0GVI7 797 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 KDM4BO94953 1096 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 TPOP07202 933 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 APEHP13798 732 aaKnown RBP15.74■□□□□ 0.11
COL9A1-201ENST00000320755 NME1P15531 152 aaKnown RBP15.74■□□□□ 0.11
COL9A1-201ENST00000320755 CAMK2BQ13554 666 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 MELKQ14680 651 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 EEF1A1P5Q5VTE0 462 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 OR7E24Q6IFN5 339 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 C9orf40Q8IXQ3 194 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 RPS4Y2Q8TD47 263 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 PELOQ9BRX2 385 aaKnown RBP15.74■□□□□ 0.11
COL9A1-201ENST00000320755 HEXA-AS1Q9H8Q6 139 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 LMAN1LQ9HAT1 526 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 MRTO4Q9UKD2 239 aaKnown RBP15.74■□□□□ 0.11
COL9A1-201ENST00000320755 ELF5Q9UKW6 265 aaPredicted RBP15.74■□□□□ 0.11
COL9A1-201ENST00000320755 ACOT7O00154 380 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 MPC2O95563 127 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 IGFBP4P22692 258 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 KIR3DL2P43630 455 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 UBE2MP61081 183 aaKnown RBP15.74■□□□□ 0.11
COL9A1-201ENST00000320755 SIX5Q8N196 739 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 PLPP7Q8NBV4 271 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 DPYSL5Q9BPU6 564 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 LAT2Q9GZY6 243 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 CA14Q9ULX7 337 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 TMEM131Q92545 1883 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 TRAV18A0A075B6X5 111 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 ANKRD20A5PA0PJZ0 165 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 CFDP00746 253 aaPredicted RBP15.74■□□□□ 0.11
COL9A1-201ENST00000320755 CALCBP10092 127 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 GP1BBP13224 206 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 ENPP1P22413 925 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 CSNK1EP49674 416 aaKnown RBP15.74■□□□□ 0.11
COL9A1-201ENST00000320755 RAG2P55895 527 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 SNTA1Q13424 505 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 ZNF227Q86WZ6 799 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 DUSP19Q8WTR2 217 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 ZDHHC12Q96GR4 267 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 ZNF285Q96NJ3 590 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 MESP1Q9BRJ9 268 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 ADAM19Q9H013 955 aa15.74■□□□□ 0.11
COL9A1-201ENST00000320755 FRG2CA6NGY1 282 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 MPZL1O95297 269 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 METTL11BQ5VVY1 283 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 SDR16C5Q8N3Y7 309 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 OR4D10Q8NGI6 311 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 LIPHQ8WWY8 451 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 DVL3Q92997 716 aaPredicted RBP15.73■□□□□ 0.11
COL9A1-201ENST00000320755 CMTM3Q96MX0 182 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 TRBV5-5A0A0J9YX44 114 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 CIB4A0PJX0 185 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 RBBP9O75884 186 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 SIX6O95475 246 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 PNPP00491 289 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 IGKV3-11P04433 115 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 PSMA6P60900 246 aaKnown RBP15.73■□□□□ 0.11
COL9A1-201ENST00000320755 EXOSC2Q13868 293 aaKnown RBP15.73■□□□□ 0.11
COL9A1-201ENST00000320755 EBPQ15125 230 aaKnown RBP15.73■□□□□ 0.11
COL9A1-201ENST00000320755 COL13A1Q5TAT6 717 aaPredicted RBP15.73■□□□□ 0.11
COL9A1-201ENST00000320755 LANCL3Q6ZV70 420 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 OR1L3Q8NH93 324 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 ZNF417Q8TAU3 575 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 OMA1Q96E52 524 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 PLEKHA1Q9HB21 404 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 EXOSC3Q9NQT5 275 aaKnown RBP15.73■□□□□ 0.11
COL9A1-201ENST00000320755 B3GNT2Q9NY97 397 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 B9D1Q9UPM9 204 aa15.73■□□□□ 0.11
COL9A1-201ENST00000320755 TMEM212A6NML5 194 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms