RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 ZNF684Q5T5D7 378 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 OR5M10Q6IEU7 315 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 LINGO2Q7L985 606 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM52Q8NDY8 209 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 OR13C2Q8NGS9 318 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 OR2I1PQ8NGU4 316 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 OR4K13Q8NH42 304 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 FAM46BQ96A09 425 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 INTS14Q96SY0 518 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 AICDAQ9GZX7 198 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 OR10A4Q9H209 315 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TP63Q9H3D4 680 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 TBCCD1Q9NVR7 557 aa7.78□□□□□ -1.16
PDLIM5-201ENST00000317968 H3BSA7 217 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 ATXN7O15265 892 aaPredicted RBP7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 DNAJB6O75190 326 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 IGKV3-11P04433 115 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM225BP0DP42 221 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 NPR2P20594 1047 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 NFATC3Q12968 1075 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 CDK10Q15131 360 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 ACER2Q5QJU3 275 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 UBE2UQ5VVX9 321 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 MINDY2Q8NBR6 621 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 OR13F1Q8NGS4 319 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 C8orf44Q96CB5 159 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF700Q9H0M5 742 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 FGF20Q9NP95 211 aaPredicted RBP7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 FAM96BQ9Y3D0 163 aa7.77□□□□□ -1.16
PDLIM5-201ENST00000317968 KIF26AQ9ULI4 1882 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 LRRTM2O43300 516 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 ABHD16AO95870 558 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 GPR85P60893 370 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 DBPQ10586 325 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 IDNKQ5T6J7 187 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF582Q96NG8 517 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 TNFRSF13CQ96RJ3 184 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 RAB1BQ9H0U4 201 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 DUSP13Q9UII6 198 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 SCN8AQ9UQD0 1980 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 ARHGEF17Q96PE2 2063 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF404Q494X3 552 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 KIRREL2Q6UWL6 708 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 BAIAP2L2Q6UXY1 529 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 TMEM179BQ7Z7N9 219 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 OR4C3Q8NH37 302 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 LGALS12Q96DT0 336 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 S100A16Q96FQ6 103 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 VNN3Q9NY84 501 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 NUFIP1Q9UHK0 495 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 ENPP5Q9UJA9 477 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 DENND4AQ7Z401 1863 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 MUC22E2RYF6 1773 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 CDX4O14627 284 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 OR2J2O76002 312 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 FBXO45P0C2W1 286 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 MYF5P13349 255 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 CDK5Q00535 292 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 PUDPQ08623 228 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 SYS1Q8N2H4 156 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 CHST11Q9NPF2 352 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 SPATA2Q9UM82 520 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 A0A1W2PQ09 198 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 CLPXO76031 633 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 SRP9P49458 86 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC25A1P53007 311 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 EMX1Q04741 257 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 C19orf48Q6RUI8 117 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 NRSN2Q9GZP1 204 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 BABAM2Q9NXR7 383 aa7.77□□□□□ -1.17
PDLIM5-201ENST00000317968 CACNA1EQ15878 2313 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 LNP1A1A4G5 178 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 ABCD4O14678 606 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 RAB3AP20336 220 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 SDHAP31040 664 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 POLR2IP36954 125 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 CDC20Q12834 499 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 FCRLAQ7L513 359 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 MARCH9Q86YJ5 346 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC35F2Q8IXU6 374 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 ARMC10Q8N2F6 343 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 IQCF1Q8N6M8 205 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 FOXRED1Q96CU9 486 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 KATNB1Q9BVA0 655 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 OSGIN1Q9UJX0 560 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 B3GALT1Q9Y5Z6 326 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 H7C1Q1 480 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 ACTL6AO96019 429 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 EIF4EP06730 217 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 TMIGD3P0DMS9 266 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 RPL27P61353 136 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF92Q03936 586 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 SHBQ15464 509 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 LSM14AQ8ND56 463 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 RDH8Q9NYR8 311 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 AMDHD2Q9Y303 409 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 PTPRZ1P23471 2315 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 CCL21O00585 134 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 BCAS1O75363 584 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms