RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PRMT8Q9NR22 394 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 CA10Q9NS85 328 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 KLK11Q9UBX7 282 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ELF5Q9UKW6 265 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ZMIZ1Q9ULJ6 1067 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 RPH3AQ9Y2J0 694 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 MEIS3P1A6NDR6 274 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 FRG2CA6NGY1 282 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ACOD1A6NK06 481 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 SNTNA6NMZ2 147 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 D6RAR5 112 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 DOK2O60496 412 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 CXCR1P25024 350 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ADH7P40394 386 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 GPR143P51810 404 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 MAP2K6P52564 334 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 AP2S1P53680 142 aaPredicted RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ANGPT1Q15389 498 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 GRK1Q15835 563 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 AANATQ16613 207 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 COL28A1Q2UY09 1125 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 HBMQ6B0K9 141 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 NIPAL3Q6P499 406 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 RNF113BQ8IZP6 322 aaKnown RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 DTWD2Q8NBA8 298 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 COQ8AQ8NI60 647 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ANGPTL6Q8NI99 470 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 LGALS14Q8TCE9 139 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 GHSRQ92847 366 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 RFKQ969G6 155 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 YIPF5Q969M3 257 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ARL5BQ96KC2 179 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 LINC00052Q96N35 136 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 SPSB2Q99619 263 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 CYSLTR2Q9NS75 346 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 BABAM2Q9NXR7 383 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 PTRH2Q9Y3E5 179 aaKnown RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 MMACHCQ9Y4U1 282 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 NPFFR2Q9Y5X5 522 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 RPS10-NUDT3A0A1W2PQS6 291 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ARPC1BO15143 372 aaKnown RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 PEX14O75381 377 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 RPP14O95059 124 aaKnown RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 HMGN1P05114 100 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 HLA-DOBP13765 273 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF3P17036 446 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ANXA7P20073 488 aaKnown RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 CDKN2AP42771 156 aaKnown RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 GRK6P43250 576 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 CTXN1P60606 82 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 RPS15P62841 145 aaKnown RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ACSM3Q53FZ2 586 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 LEG1Q6P5S2 330 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 MEPCEQ7L2J0 689 aaKnown RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 LRRC28Q86X40 367 aaPredicted RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 MS4A15Q8N5U1 240 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 OR8K3Q8NH51 312 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ABHD4Q8TB40 342 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 BRIX1Q8TDN6 353 aaKnown RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ADAMTS18Q8TE60 1221 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 KISS1RQ969F8 398 aaPredicted RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 SCMH1Q96GD3 660 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 GPR137Q96N19 417 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 LPAR4Q99677 370 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF426Q9BUY5 554 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 CLEC4MQ9H2X3 399 aaPredicted RBP6.88□□□□□ -1.31
TRIM55-202ENST00000315962 CMC2Q9NRP2 79 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 B3GNT2Q9NY97 397 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 KLRF1Q9NZS2 232 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 ADAM30Q9UKF2 790 aa6.88□□□□□ -1.31
TRIM55-202ENST00000315962 A0A0G2JK05 382 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 A0A1B0GTH9 108 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 TMEM200CA6NKL6 621 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 B8ZZF3 427 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 RAD1O60671 282 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 H2AFB2P0C5Z0 115 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 NPR2P20594 1047 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 HTR1FP30939 366 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 RAD52P43351 418 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ETFDHQ16134 617 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SLC6A19Q695T7 634 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 WBP2NLQ6ICG8 309 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 OVCH1Q7RTY7 1134 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SLITRK4Q8IW52 837 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 DNAAF1Q8NEP3 725 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 OR14A16Q8NHC5 309 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SMPDL3BQ92485 455 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ELMOD3Q96FG2 381 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SYT4Q9H2B2 425 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 DLL4Q9NR61 685 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 POLE3Q9NRF9 147 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SRPK3Q9UPE1 567 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ATP6V1G2-DDX39BF2Z307 99 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 FMO6PO60774 539 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SLC19A2O60779 497 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 NDUFB2O95178 105 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 TPOP07202 933 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SP9P0CG40 484 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 GDNFP39905 211 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms