RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NSG1A0A0A6YYJ2 146 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 TMEM269A0A1B0GVZ9 245 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 TLCD2A6NGC4 264 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 MROH6A6NGR9 719 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 ZNF891A8MT65 544 aaPredicted RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 CCSO14618 274 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 AKR7A2O43488 359 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 PTGER1P34995 402 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 PSMB3P49720 205 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 P2RX3P56373 397 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 COTL1Q14019 142 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 MSMO1Q15800 293 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 MPEG1Q2M385 716 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 TMEM88Q6PEY1 159 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 CDRT4Q8N9R6 151 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 OR1M1Q8NGA1 313 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 ANKRD9Q96BM1 317 aaPredicted RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 RAB3CQ96E17 227 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SLC41A2Q96JW4 573 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 HRASLS5Q96KN8 279 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 OR10A5Q9H207 317 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 OR10A2Q9H208 303 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 S1PR5Q9H228 398 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 NOX4Q9NPH5 578 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 DIMT1Q9UNQ2 313 aaKnown RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 ZNF337Q9Y3M9 751 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 PCDHGA1Q9Y5H4 931 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SMCHD1A6NHR9 2005 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SBF1O95248 1867 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 A0A0A6YYJ9 748 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 UMAD1C9J7I0 102 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 ZNF587BE7ETH6 402 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 PPP5D1E7EU14 171 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 KLK10O43240 276 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 GPRIN2O60269 458 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SLC16A7O60669 478 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 KCNK5O95279 499 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 PIGAP37287 484 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 TSFMP43897 325 aaKnown RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 GPR3P46089 330 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 RAB11AP62491 216 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 ASAH1Q13510 395 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 EXOSC2Q13868 293 aaKnown RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 ZNF266Q14584 549 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 KCTD11Q693B1 232 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 OR7E24Q6IFN5 339 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 MRPL21Q7Z2W9 205 aaKnown RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 DCLRE1CQ96SD1 692 aaKnown RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 GABRG3Q99928 467 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SLC25A32Q9H2D1 315 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 FBXO8Q9NRD0 319 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 LHX3Q9UBR4 397 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SPO11Q9Y5K1 396 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 CDK5RAP2Q96SN8 1893 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 TMEM72A0PK05 275 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 ACOT8O14734 319 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 NME2P1O60361 137 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 NXPH3O95157 252 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 GIPP09681 153 aaPredicted RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 GLB1P16278 677 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 ABOP16442 354 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 HTR2CP28335 458 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 HOXD11P31277 338 aaPredicted RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 UBE2IP63279 158 aaKnown RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 GABREP78334 506 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 OR1Q1Q15612 314 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 ZNF528Q3MIS6 628 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 GLYR1Q49A26 553 aaPredicted RBP7.55□□□□□ -1.2
VPS41-202ENST00000310301 CDH26Q8IXH8 852 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 AKR7LQ8NHP1 331 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 KHSRPQ92945 711 aaKnown RBP eCLIP7.55□□□□□ -1.22e-6■■□□□ 12.9
VPS41-202ENST00000310301 TSSK2Q96PF2 358 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 TAAR9Q96RI9 348 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 SDK1Q7Z5N4 2213 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 MYO7AQ13402 2215 aa7.55□□□□□ -1.2
VPS41-202ENST00000310301 IGHV1OR15-9A0A0B4J2B8 117 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 NUDT19A8MXV4 375 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 H3BML4 177 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 XRCC3O43542 346 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 OR8G3PP0DMU2 310 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 CCR9P51686 369 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 EMP3P54852 163 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 PCBP4P57723 403 aaKnown RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 FOXK1P85037 733 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 TSPAN31Q12999 210 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 IAH1Q2TAA2 248 aaPredicted RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 HENMT1Q5T8I9 393 aaKnown RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 PLCXD3Q63HM9 321 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 KMT5CQ86Y97 462 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 OR9A4Q8NGU2 314 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SAT2Q96F10 170 aaPredicted RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 CPPED1Q9BRF8 314 aaPredicted RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 VN1R3Q9BXE9 311 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 RNF167Q9H6Y7 350 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 KLHL42Q9P2K6 505 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ZMAT5Q9UDW3 170 aaKnown RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 A3GALT2U3KPV4 340 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 OLFM2O95897 454 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 TK1P04183 234 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 HBG1P69891 147 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms