RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ANKRD16Q6P6B7 361 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 DNM1P34Q6PK57 102 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 KLHL24Q6TFL4 600 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 ZNF627Q7L945 461 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 JAZF1Q86VZ6 243 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 HS3ST5Q8IZT8 346 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 FAM222BQ8WU58 562 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 MUCL1Q96DR8 90 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 MUS81Q96NY9 551 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 TSSK6Q9BXA6 273 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 ACTR6Q9GZN1 396 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 EGLN3Q9H6Z9 239 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 NGBQ9NPG2 151 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 ZNF226Q9NYT6 803 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 REV1Q9UBZ9 1251 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 PLEKHB1Q9UF11 243 aaPredicted RBP15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 KCNN3Q9UGI6 736 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 KLHL21Q9UJP4 597 aa15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 MAGED1Q9Y5V3 778 aaPredicted RBP15.76■□□□□ 0.11
SSSCA1-201ENST00000309328 TEX13CA0A0J9YWL9 993 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 A1L4Q6 167 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 BHLHE40O14503 412 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 ARHGEF9O43307 516 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 LYZL6O75951 148 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 PPP1R3DO95685 299 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 HMGN1P05114 100 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 ITGA5P08648 1049 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 KIR2DL3P43628 341 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 DAPP51397 102 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 ALDH3A2P51648 485 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 RAD23AP54725 363 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 RCN1Q15293 331 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 CLEC12AQ5QGZ9 265 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 DPPA2Q7Z7J5 298 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 HDAC2Q92769 488 aaKnown RBP15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 EME1Q96AY2 570 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 Q96M85 177 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 MED18Q9BUE0 208 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 USE1Q9NZ43 259 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 VSX1Q9NZR4 365 aaPredicted RBP15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 IL20RAQ9UHF4 553 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 AMDHD2Q9Y303 409 aa15.75■□□□□ 0.11
SSSCA1-201ENST00000309328 SAC3D1A6NKF1 404 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 OR5H1A6NKK0 313 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 DHHO43323 396 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 SOX14O95416 240 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 WNT11O96014 354 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 RENP00797 406 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 QDPRP09417 244 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 COX6B1P14854 86 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 NPR2P20594 1047 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 CRABP1P29762 137 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 CCKARP32238 428 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 GRK5P34947 590 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 MYBPC1Q00872 1141 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 RUNX1T1Q06455 604 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 DAG1Q14118 895 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 CEACAM16Q2WEN9 425 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 MESTQ5EB52 335 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 MEX3BQ6ZN04 569 aaKnown RBP15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 SYT14Q8NB59 555 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 OR1K1Q8NGR3 316 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 MCHR2Q969V1 340 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 PLA2G12AQ9BZM1 189 aa15.74■□□□□ 0.11
SSSCA1-201ENST00000309328 SLC22A23A1A5C7 686 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 SH3D21A4FU49 640 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 RIIAD1A6NNX1 92 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 CASKO14936 926 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 FARS2O95363 451 aaKnown RBP15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 TP53P04637 393 aaPredicted RBP15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 ALPLP05186 524 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 EPXP11678 715 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 ANPEPP15144 967 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 ZNF3P17036 446 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 GRNP28799 593 aaKnown RBP15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 GIPRP48546 466 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 CRISP1P54107 249 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 GABRA6Q16445 453 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 PGGHGQ32M88 737 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 LRFN4Q6PJG9 635 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 ZBTB49Q6ZSB9 765 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 OR8D4Q8NGM9 314 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 NANOS1Q8WY41 292 aaKnown RBP15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 S100PBPQ96BU1 408 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 RASD2Q96D21 266 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 NMD3Q96D46 503 aaKnown RBP15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 CIB1Q99828 191 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 FOXB1Q99853 325 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 SLC25A19Q9HC21 320 aa15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 ANKHD1Q8IWZ3 2542 aaKnown RBP15.73■□□□□ 0.11
SSSCA1-201ENST00000309328 CACNA1CQ13936 2221 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 C19orf84I3L1E1 186 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 SOCS2O14508 198 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 RAD51DO75771 328 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 HIST1H1CP16403 213 aaKnown RBP15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 PAICSP22234 425 aaKnown RBP15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 POU1F1P28069 291 aa15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 UBE2NP61088 152 aaKnown RBP15.72■□□□□ 0.11
SSSCA1-201ENST00000309328 SP5Q6BEB4 398 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 392.5 ms