RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 OR3A3P47888 321 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 NCBP2P52298 156 aaKnown RBP eCLIP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 AP2S1P53680 142 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TAS2R41P59536 307 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 RPS15P62841 145 aaKnown RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 CSNK1G2P78368 415 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 HSD11B2P80365 405 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 PITPNAQ00169 270 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 MEF2AQ02078 507 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TGM3Q08188 693 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 FUT5Q11128 374 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 HSPB3Q12988 150 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 DYRK1AQ13627 763 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TSTA3Q13630 321 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 IL18Q14116 193 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 CCDC58Q4VC31 144 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 EIPR1Q53HC9 387 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ESCO2Q56NI9 601 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 Q5BKY6 102 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 NDUFAF5Q5TEU4 345 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 OR2G6Q5TZ20 316 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TYW3Q6IPR3 259 aaKnown RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 PYHIN1Q6K0P9 492 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 HEPHL1Q6MZM0 1159 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SLC48A1Q6P1K1 146 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF620Q6ZNG0 422 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TMEM91Q6ZNR0 172 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 MBOAT2Q6ZWT7 520 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 WDR53Q7Z5U6 358 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 BCDIN3DQ7Z5W3 292 aaKnown RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ASPGQ86U10 573 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 OAFQ86UD1 273 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 CMIPQ8IY22 773 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 MMP21Q8N119 569 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 MS4A15Q8N5U1 240 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ACBD7Q8N6N7 88 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 LRRC17Q8N6Y2 441 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SYT14Q8NB59 555 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 AVL9Q8NBF6 648 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 OR2T33Q8NG76 320 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 OR8D4Q8NGM9 314 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 OR5AR1Q8NGP9 310 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 OR2L8Q8NGY9 312 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 THAP3Q8WTV1 239 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ST8SIA2Q92186 375 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SLC9A6Q92581 669 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 HGDQ93099 445 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TMEM203Q969S6 136 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 RFT1Q96AA3 541 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 EXOSC8Q96B26 276 aaKnown RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SCMH1Q96GD3 660 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 GPR137Q96N19 417 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 DCLRE1CQ96SD1 692 aaKnown RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 GPA33Q99795 319 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 FOXB1Q99853 325 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 MESP1Q9BRJ9 268 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SORBS1Q9BX66 1292 aaKnown RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ACTRT3Q9BYD9 372 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 PLA2G12AQ9BZM1 189 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ACTR6Q9GZN1 396 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SLC38A1Q9H2H9 487 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 CACYBPQ9HB71 228 aaKnown RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 PDE7BQ9NP56 450 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TRIM36Q9NQ86 728 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 PLSCR3Q9NRY6 295 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 HRASLS2Q9NWW9 162 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 HAO2Q9NYQ3 351 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 NLKQ9UBE8 527 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TRPC4Q9UBN4 977 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TAC3Q9UHF0 121 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 CES1P1Q9UKY3 287 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 BAIAP2Q9UQB8 552 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ENTPD4Q9Y227 616 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TMEM5Q9Y2B1 443 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 CARD8Q9Y2G2 431 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 NUBP2Q9Y5Y2 271 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 AUP1Q9Y679 476 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 NSD1Q96L73 2696 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 MPDZO75970 2070 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ABCA2Q9BZC7 2435 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ARPC4-TTLL3A0A0A6YYG9 625 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 OR6C74A6NCV1 312 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 WASHC1A8K0Z3 465 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 A8MV72 311 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 TMEM150CB9EJG8 249 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 RTCAO00442 366 aaKnown RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 BTN3A3O00478 584 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 LRRTM2O43300 516 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF749O43361 778 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 RNF13O43567 381 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PLPP2O43688 288 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 GSTZ1O43708 216 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 OR1F1O43749 312 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PLOD3O60568 738 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PRAF2O60831 178 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ZG16O60844 167 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ALOX12BO75342 701 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 STX11O75558 287 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SC5DO75845 299 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 WISP2O76076 250 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms