RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TRMUO75648 421 aaKnown RBP17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 QDPRP09417 244 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 MAKP20794 623 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 NR4A1P22736 598 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 YAP1P46937 504 aaKnown RBP17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 DSCR9P59020 149 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 RAB1AP62820 205 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 LOXL1Q08397 574 aaPredicted RBP17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 ST3GAL3Q11203 375 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 LAPTM4AQ15012 233 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 CLEC2AQ6UVW9 174 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 SLC22A24Q8N4F4 322 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 ANKS4BQ8N8V4 417 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 RBM15BQ8NDT2 890 aaKnown RBP17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 IL17RDQ8NFM7 739 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 HDAC2Q92769 488 aaKnown RBP17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 RHNO1Q9BSD3 238 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 DENND2DQ9H6A0 471 aaPredicted RBP17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 MED31Q9Y3C7 131 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 UGT2A1Q9Y4X1 527 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 CENPBD1B2RD01 187 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 CD5LO43866 347 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 HIST1H2ABP04908 130 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 CD79AP11912 226 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 PPOXP50336 477 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 NUDT2P50583 147 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 SNRPD2P62316 118 aaKnown RBP17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 SNTB2Q13425 540 aaKnown RBP17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 FXNQ16595 210 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 C10orf128Q5T292 105 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 KRT80Q6KB66 452 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 HIST3H2AQ7L7L0 130 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 CPLX4Q7Z7G2 160 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 HIST1H2ACQ93077 130 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 HSH2DQ96JZ2 352 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 INIPQ9NRY2 104 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 RHCGQ9UBD6 479 aa17.1■□□□□ 0.33
PDZRN3-202ENST00000308537 UBL3O95164 117 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 IGHG1P01857 330 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 BMP4P12644 408 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 ACADSP16219 412 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 NCK1P16333 377 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 NPR2P20594 1047 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 LSP1P33241 339 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 PTDSS1P48651 473 aaKnown RBP17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 PSME3P61289 254 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 MYBPC1Q00872 1141 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 RAB39AQ14964 217 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 NRN1LQ496H8 165 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 IQCCQ4KMZ1 466 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 MEX3DQ86XN8 651 aaKnown RBP17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 NRMQ8IXM6 262 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 CDK20Q8IZL9 346 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 ZCCHC24Q8N2G6 241 aaKnown RBP17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 SVOPLQ8N434 492 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 GEMIN6Q8WXD5 167 aaKnown RBP17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 FAM168AQ92567 244 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 BPIFA2Q96DR5 249 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 TNFRSF13CQ96RJ3 184 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 KCNK17Q96T54 332 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 SH3GL3Q99963 347 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 COL6A5A8TX70 2615 aa17.09■□□□□ 0.33
PDZRN3-202ENST00000308537 A0A087WUU8 490 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 GMNCA6NCL1 334 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 hCG_2039718K7EN88 272 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 SERPINA1P01009 418 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 IGHMP01871 453 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 IFNW1P05000 195 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 SERPINA5P05154 406 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 MMP7P09237 267 aaPredicted RBP17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 OR8G3PP0DMU2 310 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 IFI30P13284 250 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 SLC25A16P16260 332 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 ZNF26P17031 533 aaPredicted RBP17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 PRDX6P30041 224 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 GYS2P54840 703 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 PRKCDQ05655 676 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 DAG1Q14118 895 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 TMEM249Q2WGJ8 235 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 IFI44LQ53G44 452 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 PAQR4Q8N4S7 273 aaPredicted RBP17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 SYT14Q8NB59 555 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 OR4K5Q8NGD3 323 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 LZICQ8WZA0 190 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 NABP1Q96AH0 204 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 MRPL37Q9BZE1 423 aaKnown RBP17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 TXNIPQ9H3M7 391 aa17.08■□□□□ 0.32
PDZRN3-202ENST00000308537 A0A1W2PRG6 482 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 HTR3EA5X5Y0 456 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 CRLF1O75462 422 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 SLC2A10O95528 541 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 ZNF682O95780 498 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 CSF3P09919 207 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 GLRXP35754 106 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 DAP3P51398 398 aaKnown RBP17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 VLDLRP98155 873 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 FMODQ06828 376 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 TBPL2Q6SJ96 375 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 FAM86B1Q8N7N1 296 aa17.07■□□□□ 0.32
PDZRN3-202ENST00000308537 CLDN22Q8N7P3 220 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms