RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 EMC6Q9BV81 110 aa6.21□□□□□ -1.41
PTCD2-201ENST00000308077 MND1Q9BWT6 205 aa6.21□□□□□ -1.41
PTCD2-201ENST00000308077 NUAK2Q9H093 628 aa6.21□□□□□ -1.41
PTCD2-201ENST00000308077 SRA1Q9HD15 236 aaKnown RBP6.21□□□□□ -1.41
PTCD2-201ENST00000308077 KLHL13Q9P2N7 655 aa6.21□□□□□ -1.41
PTCD2-201ENST00000308077 RSL24D1Q9UHA3 163 aaKnown RBP6.21□□□□□ -1.41
PTCD2-201ENST00000308077 NPIPA1Q9UND3 350 aa6.21□□□□□ -1.41
PTCD2-201ENST00000308077 LIPGQ9Y5X9 500 aa6.21□□□□□ -1.41
PTCD2-201ENST00000308077 IGLV1-36A0A0B4J1U3 117 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 IGKV1D-43A0A0B4J1Z2 117 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 TMEM129A0AVI4 362 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 SLC22A23A1A5C7 686 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 CLEC18AA5D8T8 446 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 GJE1A6NN92 205 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 H3BMQ9 156 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 MYL12BO14950 172 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 SELENOFO60613 162 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 TRMUO75648 421 aaKnown RBP6.21□□□□□ -1.42
PTCD2-201ENST00000308077 BCL10O95999 233 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 RENP00797 406 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 HSMCR30P0CW71 290 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 PSKH1P11801 424 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 CTLA4P16410 223 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 MYL12AP19105 171 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 ENPP1P22413 925 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 ATP6V1E1P36543 226 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 PEX19P40855 299 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 EIF2S3P41091 472 aaKnown RBP6.21□□□□□ -1.42
PTCD2-201ENST00000308077 LHX2P50458 406 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 DAP3P51398 398 aaKnown RBP6.21□□□□□ -1.42
PTCD2-201ENST00000308077 HCCSP53701 268 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 BIDP55957 195 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 PPIAP62937 165 aaKnown RBP6.21□□□□□ -1.42
PTCD2-201ENST00000308077 CSNK2A1P68400 391 aaPredicted RBP6.21□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF85Q03923 595 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 FMODQ06828 376 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 LGALS3BPQ08380 585 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 AQP6Q13520 282 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 PON3Q15166 354 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 ETFDHQ16134 617 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 LCN1P1Q5VSP4 162 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 CLEC18BQ6UXF7 455 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 SSX6Q7RTT6 188 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 GPAT4Q86UL3 456 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 UEVLDQ8IX04 471 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF511Q8NB15 262 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 CLEC18CQ8NCF0 446 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 OR10H4Q8NGA5 316 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 OR6K6Q8NGW6 343 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 OR2V1Q8NHB1 315 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 TM9SF4Q92544 642 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 MS4A3Q96HJ5 214 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 OXGR1Q96P68 337 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 KCNK17Q96T54 332 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 MYCBPQ99417 103 aaPredicted RBP6.21□□□□□ -1.42
PTCD2-201ENST00000308077 CNN2Q99439 309 aaKnown RBP6.21□□□□□ -1.42
PTCD2-201ENST00000308077 TSC22D3Q99576 134 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 MGLLQ99685 303 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 ENPP5Q9UJA9 477 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 COPS3Q9UNS2 423 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 NOX1Q9Y5S8 564 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 LAMA5O15230 3695 aa6.21□□□□□ -1.42
PTCD2-201ENST00000308077 SPENQ96T58 3664 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 A0A087WV48 116 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 LOC102725191A0A1B0GVB3 256 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 A0A1W2PQL4 384 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 TVP23AA6NH52 213 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 A6NIZ1 184 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SMAD9O15198 467 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 CXCL13O43927 109 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 EIF1BO60739 113 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 LALBAP00709 142 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 PDGFAP04085 211 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 CD36P16671 472 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 AGFG1P52594 562 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 WNT4P56705 351 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 CLDN18P56856 261 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 RAC3P60763 192 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 RAP1BP61224 184 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 RAP1AP62834 184 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 POU4F2Q12837 409 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SPHARQ15513 63 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SSX1Q16384 188 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 TSTQ16762 297 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 OTPQ5XKR4 325 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 HBMQ6B0K9 141 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 TMEM225Q6GV28 225 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ESPNLQ6ZVH7 1005 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ASB18Q6ZVZ8 466 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ZBTB46Q86UZ6 589 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SLC22A16Q86VW1 577 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ANKRD13BQ86YJ7 626 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SLC35F2Q8IXU6 374 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 TIGD4Q8IY51 512 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 FAM109AQ8N4B1 249 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ACBD7Q8N6N7 88 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 POMGNT2Q8NAT1 580 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SYT14Q8NB59 555 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 OR2T4Q8NH00 348 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 OR10D3Q8NH80 312 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms