RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 FER1L6-AS2Q96M78 137 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 EPHX3Q9H6B9 360 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 C12orf49Q9H741 205 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 MED20Q9H944 212 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 WDR76Q9H967 626 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 RNF150Q9ULK6 438 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 TCN2P20062 427 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 PPP2CAP67775 309 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 LRRTM1Q86UE6 522 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 SIAH1Q8IUQ4 282 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 LINC00346Q8IVM7 164 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 VAPAQ9P0L0 249 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 FABP7O15540 132 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 TOX4O94842 621 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 MPGP29372 298 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 S100A11P31949 105 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF91Q05481 1191 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 TBCEQ15813 527 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 SYPL1Q16563 259 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 TOR2AQ5JU69 321 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 HBMQ6B0K9 141 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 MISPQ8IVT2 679 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 NAXDQ8IW45 347 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 KCNRGQ8N5I3 272 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 FAM71CQ8NEG0 241 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 OR4F5Q8NH21 305 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 PINX1Q96BK5 328 aaKnown RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF597Q96LX8 424 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 OR4F4Q96R69 305 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 UQCC2Q9BRT2 126 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 SPHK1Q9NYA1 384 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 COL1A1P02452 1464 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 G3V3Q6 166 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 HS3ST1O14792 307 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 CSF3P09919 207 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 ITGB7P26010 798 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 BMPR1AP36894 532 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 MS4A2Q01362 244 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 PARP12Q9H0J9 701 aaKnown RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 ZDHHC11Q9H8X9 412 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 DUSP22Q9NRW4 184 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 ACTL7AQ9Y615 435 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 LOC102723971A0A1B0GUV8 181 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 PRSS38A1L453 326 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 OR2T7P0C7T2 308 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF280AP59817 542 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 TSPAN31Q12999 210 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 RTP2Q5QGT7 225 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 RNF113BQ8IZP6 322 aaKnown RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 LANCL2Q9NS86 450 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 MYH6P13533 1939 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 GALR2O43603 387 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 F10P00742 488 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 ELAVL4P26378 380 aaKnown RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 NKX2-1P43699 371 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 NTHL1P78549 312 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 CDK5Q00535 292 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 ENDOGQ14249 297 aaKnown RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 CYS1Q717R9 158 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 OR10Z1Q8NGY1 313 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 RBPMSQ93062 196 aaKnown RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 UTP4Q969X6 686 aaKnown RBP9.6□□□□□ -0.87
CLIP1-201ENST00000302528 AK3Q9UIJ7 227 aa9.6□□□□□ -0.87
CLIP1-201ENST00000302528 CRXO43186 299 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-201ENST00000302528 EIF1BO60739 113 aaKnown RBP9.59□□□□□ -0.87
CLIP1-201ENST00000302528 SIX6O95475 246 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 RGRP47804 291 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 ETV1P50549 477 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 CCL11P51671 97 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 BPIFB3P59826 476 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 ACKR1Q16570 336 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF691Q5VV52 312 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 TSEN54Q7Z6J9 526 aaKnown RBP9.59□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF595Q8IYB9 648 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 BHLHE23Q8NDY6 225 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 GHSRQ92847 366 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM230Q96A57 120 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF835Q9Y2P0 537 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 MYH10P35580 1976 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 PMS2P2O95744 297 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 S100A4P26447 101 aaKnown RBP9.59□□□□□ -0.87
CLIP1-201ENST00000302528 CD38P28907 300 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 MAT1AQ00266 395 aaKnown RBP9.59□□□□□ -0.87
CLIP1-201ENST00000302528 NRARPQ7Z6K4 114 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 CLEC14AQ86T13 490 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 CBARPQ8N350 705 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-201ENST00000302528 ZADH2Q8N4Q0 377 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 ACPTQ9BZG2 426 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 FBXO8Q9NRD0 319 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 TRAV36DV7A0A075B6V5 113 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 SLC5A10A0PJK1 596 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 KLRC4-KLRK1H3BQV0 150 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 J3KTA2 159 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 OR7C2O60412 319 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 SNNO75324 88 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-201ENST00000302528 IQCF3P0C7M6 154 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 FOXA1P55317 472 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 RPS25P62851 125 aaKnown RBP9.59□□□□□ -0.87
CLIP1-201ENST00000302528 HSF1Q00613 529 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 SFXN4Q6P4A7 337 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms