RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 PLAGL1Q9UM63 463 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 SGK494L7N484 410 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 SYN3O14994 580 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 CNIH1O95406 144 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 AANATQ16613 207 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 AMMECR1LQ6DCA0 310 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 H2BFWTQ7Z2G1 175 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 SLC35B2Q8TB61 432 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 SGK494Q96LW2 274 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 LRRC3CA6NJW4 275 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 TBX18O95935 607 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 ACP2P11117 423 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 TNFSF8P32971 234 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 GPR33Q49SQ1 333 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 FCRLBQ6BAA4 426 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 CD244Q9BZW8 370 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 MN1Q10571 1320 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 RFX2P48378 723 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 FCRLAQ7L513 359 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 DDX31Q9H8H2 851 aaKnown RBP10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 RBFOX1Q9NWB1 397 aaKnown RBP10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 KCPQ6ZWJ8 1503 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 SLC38A8A6NNN8 435 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 ORM1P02763 201 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 YBEYP58557 167 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 GHRHRQ02643 423 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 CMTM4Q8IZR5 234 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 ADPRHL1Q8NDY3 354 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 OR13C8Q8NGS7 320 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 FBXW5Q969U6 566 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 IL17BQ9UHF5 180 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 NENFQ9UMX5 172 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 KLK4Q9Y5K2 254 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 DOCK1Q14185 1865 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 PCSK6P29122 969 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 SYT6Q5T7P8 510 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 RIMS4Q9H426 269 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 LIPGQ9Y5X9 500 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 ACOD1A6NK06 481 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 MSCO60682 206 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 GDNFP39905 211 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 SHHQ15465 462 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 CDHR3Q6ZTQ4 885 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 MAML2Q8IZL2 1156 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 ENKD1Q9H0I2 346 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 ATRNL1Q5VV63 1379 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 EMC8O43402 210 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 IRS1P35568 1242 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 ERVPABLB-1P60509 514 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 MLLT11Q13015 90 aaPredicted RBP10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 PLEKHS1Q5SXH7 462 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 LGALS14Q8TCE9 139 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 GABRQQ9UN88 632 aa10.39□□□□□ -0.75
HDGFL3-201ENST00000299633 DBHP09172 617 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 GAB4Q2WGN9 574 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 OR52R1Q8NGF1 315 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 TFAP2CQ92754 450 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 PKIBQ9C010 78 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 CACNA1HO95180 2353 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 OR5G3P0C626 314 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 OSMP13725 252 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 NADSYN1Q6IA69 706 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 LRRTM4Q86VH4 590 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 GPX8Q8TED1 209 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 TSC2P49815 1807 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 SEMA7AO75326 666 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 ELNP15502 786 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 AGFG1P52594 562 aaKnown RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 LCN8Q6JVE9 175 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 IKZF5Q9H5V7 419 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 TIA1P31483 386 aaKnown RBP eCLIP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 MTCP1P56278 107 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 SEC61A1P61619 476 aaKnown RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 ELOBQ15370 118 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 SIAH3Q8IW03 269 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 TMEM238LA0A1B0GVL6 79 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 A6NJY4 79 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 BMP2P12643 396 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 XCR1P46094 333 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 Q5PR19 223 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 ZNF761Q86XN6 746 aaPredicted RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 SLC35E1Q96K37 410 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 RBM24Q9BX46 236 aaKnown RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 SCML1Q9UN30 329 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 IGKV6D-41A0A0C4DH26 115 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 SOCS7O14512 581 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 HSD17B6O14756 317 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 APEX1P27695 318 aaKnown RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 OPN5Q6U736 354 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 GRAMD2AQ8IUY3 354 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 SFXN2Q96NB2 322 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 PRRC2AP48634 2157 aaKnown RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 hCG_1809904A0A1W2PP81 198 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 A0A1W2PPE2 198 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 A0A1W2PR64 198 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 A0A1W2PRV1 198 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 CCR7P32248 378 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 GPM6AP51674 278 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 RPS24P62847 133 aaKnown RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 PHLDA2Q53GA4 152 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms