RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 INTS14Q96SY0 518 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 TTTY12Q9BZ98 90 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 RNF32Q9H0A6 362 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 B4GALT7Q9UBV7 327 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 CLPXO76031 633 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 ZNF43P17038 809 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 CAPZA2P47755 286 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 GGNQ86UU5 652 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 CDC20BQ86Y33 519 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 OR6N2Q8NGY6 317 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 CCDC86Q9H6F5 360 aaKnown RBP20.41■□□□□ 0.86
PTX3-201ENST00000295927 RASD1Q9Y272 281 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 KLHDC2Q9Y2U9 406 aa20.41■□□□□ 0.86
PTX3-201ENST00000295927 CELSR3Q9NYQ7 3312 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 ZNF891A8MT65 544 aaPredicted RBP20.4■□□□□ 0.86
PTX3-201ENST00000295927 HLA-DQA2P01906 255 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 CD46P15529 392 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 CD97P48960 835 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 BLVRAP53004 296 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 GFRA1P56159 465 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 ARG2P78540 354 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 FMODQ06828 376 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 GPR50Q13585 617 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 MRPL48Q96GC5 212 aaKnown RBP20.4■□□□□ 0.86
PTX3-201ENST00000295927 ADAD1Q96M93 576 aaKnown RBP20.4■□□□□ 0.86
PTX3-201ENST00000295927 NAA11Q9BSU3 229 aaPredicted RBP20.4■□□□□ 0.86
PTX3-201ENST00000295927 TMED9Q9BVK6 235 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.4■□□□□ 0.86
PTX3-201ENST00000295927 TXNL4BQ9NX01 149 aaKnown RBP20.4■□□□□ 0.86
PTX3-201ENST00000295927 KLHL13Q9P2N7 655 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 COA3Q9Y2R0 106 aaPredicted RBP20.4■□□□□ 0.86
PTX3-201ENST00000295927 PMF1-BGLAPU3KQ54 211 aa20.4■□□□□ 0.86
PTX3-201ENST00000295927 IGHV3-15A0A0B4J1V0 119 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 EIF1AYO14602 144 aaKnown RBP20.39■□□□□ 0.86
PTX3-201ENST00000295927 HPNP05981 417 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 STARP49675 285 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 MEOX1P50221 254 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 TAS2R43P59537 309 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 FABP5Q01469 135 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 CRTC2Q53ET0 693 aaPredicted RBP20.39■□□□□ 0.86
PTX3-201ENST00000295927 CD200R1LQ6Q8B3 271 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 FDCSPQ8NFU4 85 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 ZFAND2BQ8WV99 257 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 PELI1Q96FA3 418 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 UCN2Q96RP3 112 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 MRPL13Q9BYD1 178 aaKnown RBP20.39■□□□□ 0.86
PTX3-201ENST00000295927 SRXN1Q9BYN0 137 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 GNG8Q9UK08 70 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 KLK13Q9UKR3 277 aa20.39■□□□□ 0.86
PTX3-201ENST00000295927 SLC35F4A4IF30 521 aa20.39■□□□□ 0.85
PTX3-201ENST00000295927 FAM166BA8MTA8 275 aa20.39■□□□□ 0.85
PTX3-201ENST00000295927 PRR32B1ATL7 298 aa20.39■□□□□ 0.85
PTX3-201ENST00000295927 DNM1P34Q6PK57 102 aa20.39■□□□□ 0.85
PTX3-201ENST00000295927 RPTNQ6XPR3 784 aa20.39■□□□□ 0.85
PTX3-201ENST00000295927 DPY19L4Q7Z388 723 aa20.39■□□□□ 0.85
PTX3-201ENST00000295927 UBQLNLQ8IYU4 475 aa20.39■□□□□ 0.85
PTX3-201ENST00000295927 SLIRPQ9GZT3 109 aaKnown RBP20.39■□□□□ 0.85
PTX3-201ENST00000295927 MRPL22Q9NWU5 206 aaKnown RBP20.39■□□□□ 0.85
PTX3-201ENST00000295927 GRIP1Q9Y3R0 1128 aa20.39■□□□□ 0.85
PTX3-201ENST00000295927 IGKV1D-43A0A0B4J1Z2 117 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 KLRC4-KLRK1H3BQV0 150 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 CELA3AP09093 270 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 PSKH1P11801 424 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 POU3F2P20265 443 aaPredicted RBP20.38■□□□□ 0.85
PTX3-201ENST00000295927 RPS27P42677 84 aaKnown RBP20.38■□□□□ 0.85
PTX3-201ENST00000295927 MAGEA5P43359 124 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 AGFG1P52594 562 aaKnown RBP20.38■□□□□ 0.85
PTX3-201ENST00000295927 RAC3P60763 192 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 PLGLB1Q02325 96 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 GLO1Q04760 184 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 CAMK2DQ13557 499 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 DEFB109BQ30KR1 87 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 OTPQ5XKR4 325 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 C22orf42Q6IC83 251 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 ESPNLQ6ZVH7 1005 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 TMEM251Q8N6I4 163 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 SLC25A44Q96H78 314 aaPredicted RBP20.38■□□□□ 0.85
PTX3-201ENST00000295927 MNTQ99583 582 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 LAMP5Q9UJQ1 280 aa20.38■□□□□ 0.85
PTX3-201ENST00000295927 PSMD9O00233 223 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 DNPH1O43598 174 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 ALOX5APP20292 161 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 GBX2P52951 348 aaPredicted RBP20.37■□□□□ 0.85
PTX3-201ENST00000295927 SUCLG1P53597 346 aaKnown RBP20.37■□□□□ 0.85
PTX3-201ENST00000295927 ZNF684Q5T5D7 378 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 HBMQ6B0K9 141 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 ARL9Q6T311 187 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 OR6X1Q8NH79 312 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 ADGRG7Q96K78 797 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 MFRPQ9BY79 579 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 ACOXLQ9NUZ1 547 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 ST6GALNAC2Q9UJ37 374 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 TRDV1A0A1B0GX56 115 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 ZNF593O00488 134 aaPredicted RBP20.37■□□□□ 0.85
PTX3-201ENST00000295927 PLPP2O43688 288 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 GLSO94925 669 aaPredicted RBP20.37■□□□□ 0.85
PTX3-201ENST00000295927 VAMP5O95183 116 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 IGHG1P01857 330 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 PGA4P0DJD7 388 aa20.37■□□□□ 0.85
PTX3-201ENST00000295927 PGA3P0DJD8 388 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms