RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 HHEXQ03014 270 aa10.9□□□□□ -0.67
SYNGAP1-201ENST00000293748 TBPL2Q6SJ96 375 aa10.9□□□□□ -0.67
SYNGAP1-201ENST00000293748 RBMXL1Q96E39 390 aaKnown RBP10.9□□□□□ -0.67
SYNGAP1-201ENST00000293748 NEURL3Q96EH8 262 aa10.9□□□□□ -0.67
SYNGAP1-201ENST00000293748 SENP5Q96HI0 755 aaPredicted RBP10.9□□□□□ -0.67
SYNGAP1-201ENST00000293748 GCM1Q9NP62 436 aa10.9□□□□□ -0.67
SYNGAP1-201ENST00000293748 A0A0U1RQS6 177 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 B4DXG7 233 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 ACTL6BO94805 426 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 GPR75O95800 540 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 FURINP09958 794 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 HTR2CP28335 458 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 TRIM23P36406 574 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 EFNA3P52797 238 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 HCCSP53701 268 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 DEFB133Q30KQ1 61 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 COX15Q7KZN9 410 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 PLXDC1Q8IUK5 500 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 NLGN4XQ8N0W4 816 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 KDM8Q8N371 416 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 NANOGP1Q8N7R0 232 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 RSC1A1Q92681 617 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 AMBRA1Q9C0C7 1298 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 A4GALTQ9NPC4 353 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 NDRG4Q9ULP0 352 aaKnown RBP10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 KIR2DS5A0A0G2JLQ3 304 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 A0A0G2JNG1 304 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 TMEM200CA6NKL6 621 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 KIR2DS3K7RE56 304 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 TNFSF14O43557 240 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 LIMK1P53667 647 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 SRPXP78539 464 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 TLE4Q04727 773 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 PRDX1Q06830 199 aaKnown RBP10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 KIR2DS5Q14953 304 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 RSPO4Q2I0M5 234 aaPredicted RBP10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 XKR7Q5GH72 579 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 FBXW12Q6X9E4 464 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 RBMS3Q6XE24 437 aaKnown RBP10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 CMIPQ8IY22 773 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 DEFB124Q8NES8 71 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 SGK3Q96BR1 496 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 CDCA4Q9BXL8 241 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 TMEM74BQ9NUR3 256 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 HMX2A2RU54 273 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 CPMP14384 443 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 CSRP1P21291 193 aaKnown RBP10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 MAGEB1P43366 347 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 CLDN12P56749 244 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 SQSTM1Q13501 440 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 GPR176Q14439 515 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 MSMO1Q15800 293 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 YIF1BQ5BJH7 314 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZMAT1Q5H9K5 638 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 MRPL2Q5T653 305 aaKnown RBP10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 VASH1Q7L8A9 365 aaPredicted RBP10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF566Q969W8 418 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 RAB39BQ96DA2 213 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 LRRC46Q96FV0 321 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 NIPSNAP3BQ9BS92 247 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 TEX101Q9BY14 249 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF286AQ9HBT8 521 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 UBQLN4Q9NRR5 601 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 PLEK2Q9NYT0 353 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 CACNA1HO95180 2353 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 C17orf105B2RV13 164 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 TK1P04183 234 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 NME2P22392 152 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 GZMKP49863 264 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 CCR6P51684 374 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 SEC61A1P61619 476 aaKnown RBP10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 LTB4RQ15722 352 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 FAM69BQ5VUD6 431 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 VASNQ6EMK4 673 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 H3F3CQ6NXT2 135 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 NANOS1Q8WY41 292 aaKnown RBP10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 FAM131CQ96AQ9 280 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 DDOQ99489 341 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 ALG12Q9BV10 488 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 OCEL1Q9H607 264 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 KCMF1Q9P0J7 381 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 KPTNQ9Y664 436 aa10.89□□□□□ -0.67
SYNGAP1-201ENST00000293748 PRSS44E7EML9 344 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 SMLR1H3BR10 107 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 RAF1P04049 648 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 ETV5P41161 510 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 EXOSC6Q5RKV6 272 aaKnown RBP10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 CCNJQ5T5M9 372 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 PXDC1Q5TGL8 231 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 TMUB2Q71RG4 321 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 NDUFAF7Q7L592 441 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 MRPL21Q7Z2W9 205 aaKnown RBP10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 RNF175Q8N4F7 328 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR52R1Q8NGF1 315 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 FAM213BQ8TBF2 198 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 ST8SIA4Q92187 359 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR52A5Q9H2C5 316 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 LIN7BQ9HAP6 207 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 NUP205Q92621 2012 aa10.88□□□□□ -0.67
SYNGAP1-201ENST00000293748 KIF26AQ9ULI4 1882 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms