RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SLC25A21Q9BQT8 299 aaPredicted RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 PLK3Q9H4B4 646 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 MRPL22Q9NWU5 206 aaKnown RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 MYOTQ9UBF9 498 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 PCDHB10Q9UN67 800 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 LRIT2A6NDA9 550 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 SEC14L6B5MCN3 397 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 H7BYZ3 331 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 HSPB6O14558 160 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 DFFBO76075 338 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 IGFBP1P08833 259 aaPredicted RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 HNRNPA1P09651 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 CCR7P32248 378 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 RUNX3Q13761 415 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 RAB33AQ14088 237 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 KIR2DS3Q14952 304 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 FAM209BQ5JX69 171 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 TMEM71Q6P5X7 295 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 TBPL2Q6SJ96 375 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 KANSL1Q7Z3B3 1105 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 CPEB2Q7Z5Q1 589 aaKnown RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF480Q8WV37 535 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 LIPHQ8WWY8 451 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF566Q969W8 418 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 INTS12Q96CB8 462 aaKnown RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 TNFRSF13CQ96RJ3 184 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 TAS2R5Q9NYW4 299 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF230Q9UIE0 474 aaPredicted RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 DIMT1Q9UNQ2 313 aaKnown RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 SEMA4FO95754 770 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 TSPAN12O95859 305 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 RPA2P15927 270 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 TACR1P25103 407 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 LIPAP38571 399 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 HTR5AP47898 357 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 ARL16Q0P5N6 197 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 TEX261Q6UWH6 196 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 GTF2H5Q6ZYL4 71 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 RNF113BQ8IZP6 322 aaKnown RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 IER2Q9BTL4 223 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 C1orf198Q9H425 327 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 TREX1Q9NSU2 369 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 ACSS1Q9NUB1 689 aaPredicted RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 U3KQ87 197 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 A0A0J9YY10 115 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 OR6C68A6NDL8 312 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 SMAD6O43541 496 aaKnown RBP9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 OR10J4P0C629 311 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 RD3LP0DJH9 198 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 OR1D4P47884 311 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 CTSCP53634 463 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 DBX2Q6ZNG2 339 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 C20orf27Q9GZN8 174 aa9.93□□□□□ -0.82
PKNOX1-201ENST00000291547 CDC14CA4D256 554 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 OR2C1O95371 312 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 GPR75O95800 540 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 PNPP00491 289 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CT45A6P0DMU7 189 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CT45A5P0DMU8 189 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CT45A7P0DMV0 189 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CT45A8P0DMV1 189 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CT45A9P0DMV2 189 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CPMP14384 443 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 S100A7P31151 101 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 RABIFP47224 123 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 GABRA4P48169 554 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 AQP6Q13520 282 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CRMP1Q14194 572 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CT45A2Q5DJT8 189 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CT45A1Q5HYN5 189 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF684Q5T5D7 378 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 C9orf135Q5VTT2 229 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 C17orf107Q6ZR85 190 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 MMP21Q8N119 569 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 LFNGQ8NES3 379 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 OR52E1Q8NGJ3 308 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 OR4A16Q8NH70 328 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CT45A3Q8NHU0 189 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 TRAF4Q9BUZ4 470 aaPredicted RBP9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 HEYLQ9NQ87 328 aaPredicted RBP9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF331Q9NQX6 463 aaPredicted RBP9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 STEAP1Q9UHE8 339 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 SNX11Q9Y5W9 270 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 ZNF724A8MTY0 619 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 TRIM77I1YAP6 450 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 CSO75390 466 aaKnown RBP9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 PAPLNO95428 1278 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 POU3F2P20265 443 aaPredicted RBP9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 NPY4RP50391 375 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 UBE2G2P60604 165 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 GRB2P62993 217 aaKnown RBP9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 VAMP3Q15836 100 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 SLC16A14Q7RTX9 510 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 HSD11B1LQ7Z5J1 315 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 LINC01465Q8N7H1 131 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 OR51A4Q8NGJ6 313 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 OR2G3Q8NGZ4 309 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 FBXW5Q969U6 566 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 YIPF6Q96EC8 236 aa9.92□□□□□ -0.82
PKNOX1-201ENST00000291547 TPSD1Q9BZJ3 242 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms