RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 UPK1AO00322 258 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 EDN3P14138 238 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 IDH3GP51553 393 aaPredicted RBP16.97■□□□□ 0.31
PCDH1-201ENST00000287008 PRTGQ2VWP7 1150 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 TMEM92Q6UXU6 159 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 SLC16A9Q7RTY1 509 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 LIMS2Q7Z4I7 341 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 GTPBP8Q8N3Z3 284 aaPredicted RBP16.97■□□□□ 0.31
PCDH1-201ENST00000287008 TP53I13Q8NBR0 393 aaPredicted RBP16.97■□□□□ 0.31
PCDH1-201ENST00000287008 PFN4Q8NHR9 129 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 ABHD4Q8TB40 342 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 PHYHIPQ92561 330 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 FGGYQ96C11 551 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 FBXO7Q9Y3I1 522 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 A0A1B0GV50 99 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 TFP02787 698 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 MAP2K6P52564 334 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 ZNF808Q8N4W9 903 aaPredicted RBP16.97■□□□□ 0.31
PCDH1-201ENST00000287008 ZBTB8AQ96BR9 441 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 HSPB6O14558 160 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 GM2AP17900 193 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 TMEM102Q8N9M5 508 aaPredicted RBP16.97■□□□□ 0.31
PCDH1-201ENST00000287008 RHOXF1Q8NHV9 184 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 KCNE4Q8WWG9 221 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 TIMD4Q96H15 378 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 CNOT1A5YKK6 2376 aaKnown RBP16.97■□□□□ 0.31
PCDH1-201ENST00000287008 ARPC5O15511 151 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 TNFSF8P32971 234 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 PTGER4P35408 488 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 CLDN6P56747 220 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 ACTBL2Q562R1 376 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 FCRL6Q6DN72 434 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 MED18Q9BUE0 208 aa16.97■□□□□ 0.31
PCDH1-201ENST00000287008 IGHV1OR15-9A0A0B4J2B8 117 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 ZNF732B4DXR9 585 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 CTDSP2O14595 271 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 UPK1BO75841 260 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 SNRPBP14678 240 aaKnown RBP16.96■□□□□ 0.31
PCDH1-201ENST00000287008 SDHBP21912 280 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 IHHQ14623 411 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 ACKR1Q16570 336 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 DEFB124Q8NES8 71 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 MSI2Q96DH6 328 aaKnown RBP16.96■□□□□ 0.31
PCDH1-201ENST00000287008 BOD1Q96IK1 185 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 TRIB1Q96RU8 372 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 C1QTNF6Q9BXI9 259 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 BCL2L10Q9HD36 194 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 NDRG3Q9UGV2 375 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 SLC16A6O15403 523 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 QDPRP09417 244 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 RNF4P78317 190 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 FZD2Q14332 565 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 HACD4Q5VWC8 232 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 PIGTQ969N2 578 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 CNRIP1Q96F85 164 aaPredicted RBP16.96■□□□□ 0.31
PCDH1-201ENST00000287008 MRGPRX3Q96LB0 322 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 TRAV17A0A0B4J275 112 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 ZNF705EA8MWA4 302 aaPredicted RBP16.96■□□□□ 0.31
PCDH1-201ENST00000287008 DLX5P56178 289 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 FAPQ12884 760 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 GPR155Q7Z3F1 870 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 COMTD1Q86VU5 262 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 C12orf45Q8N5I9 185 aaPredicted RBP16.96■□□□□ 0.31
PCDH1-201ENST00000287008 GAB3Q8WWW8 586 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 UPRTQ96BW1 309 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 MRGPRX4Q96LA9 322 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 TSNAXQ99598 290 aaKnown RBP16.96■□□□□ 0.31
PCDH1-201ENST00000287008 UNKLQ9H9P5 680 aaKnown RBP16.96■□□□□ 0.31
PCDH1-201ENST00000287008 FKRPQ9H9S5 495 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 RCE1Q9Y256 329 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 B3GALT5Q9Y2C3 310 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 PPIL1Q9Y3C6 166 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 KLK4Q9Y5K2 254 aa16.96■□□□□ 0.31
PCDH1-201ENST00000287008 GRPP07492 148 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 DUSP2Q05923 314 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 IL11RAQ14626 422 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 FBXW12Q6X9E4 464 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 PHC2Q8IXK0 858 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 ARIH2OSQ8N7S6 290 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 CPEB3Q8NE35 698 aaKnown RBP16.96■□□□□ 0.3
PCDH1-201ENST00000287008 OR52N1Q8NH53 320 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 RNF170Q96K19 258 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 BARHL1Q9BZE3 327 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 FAM117AQ9C073 453 aa16.96■□□□□ 0.3
PCDH1-201ENST00000287008 CBR3O75828 277 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 ETHE1O95571 254 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 GIFP27352 417 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 SHC1P29353 583 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 SYT14P1Q58G82 188 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 YIF1BQ5BJH7 314 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 AADACL3Q5VUY0 350 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 Q6ZTK2 550 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 SLC46A3Q7Z3Q1 461 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 ENTHD1Q8IYW4 607 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 NKAIN3Q8N8D7 197 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 GCM1Q9NP62 436 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 TSPAN12O95859 305 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 EPHA8P29322 1005 aaPredicted RBP16.95■□□□□ 0.3
PCDH1-201ENST00000287008 RFC3P40938 356 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 TNK1Q13470 666 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms