RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 FOXQ1Q9C009 403 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF768Q9H5H4 540 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 SHPKQ9UHJ6 478 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 PCOLCE2Q9UKZ9 415 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 IFITM5A6NNB3 132 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 FFAR1O14842 300 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 WNT1P04628 370 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 SNRNP70P08621 437 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 CPMP14384 443 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 GALP22466 123 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 DCTDP32321 178 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 MVDP53602 400 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 HCCSP53701 268 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 TAS2R31P59538 309 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 S100A12P80511 92 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 CHRFAM7AQ494W8 412 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 MFSD12Q6NUT3 480 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 TMEM81Q6P7N7 255 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 TMEM88Q6PEY1 159 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 ESX1Q8N693 406 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 OR2AK2Q8NG84 335 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 OR10R2Q8NGX6 335 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC37A2Q8TED4 501 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 RBP7Q96R05 134 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 PPP1R3EQ9H7J1 279 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF701Q9NV72 531 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 PRELID3BQ9Y3B1 194 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF337Q9Y3M9 751 aa10.57□□□□□ -0.72
CLSTN3-201ENST00000266546 A0A1B0GWA3 101 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 AIPO00170 330 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC6A9P48067 706 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 ABHD17CQ6PCB6 329 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 CDH26Q8IXH8 852 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 LNX2Q8N448 690 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF511Q8NB15 262 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 GPBAR1Q8TDU6 330 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 FBXW5Q969U6 566 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 SMIM19Q96E16 107 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 TCTN2Q96GX1 697 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC25A44Q96H78 314 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 SEMA6CQ9H3T2 930 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 STARD5Q9NSY2 213 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 IL20Q9NYY1 176 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 ELF5Q9UKW6 265 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 OR5K3A6NET4 321 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 H7C417 338 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 TLX3O43711 291 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 CSTBP04080 98 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 BSGP35613 385 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 SNTB1Q13884 538 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 RNLSQ5VYX0 342 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 FAM111BQ6SJ93 734 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF836Q6ZNA1 936 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 OR11H7Q8NGC8 314 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 OR4Q3Q8NH05 313 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 CHRDQ9H2X0 955 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 MAN2C1Q9NTJ4 1040 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 KCND3Q9UK17 655 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 LRIT2A6NDA9 550 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 IFNA17P01571 189 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 GAAP10253 952 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 ATF1P18846 271 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 BCL6P41182 706 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 SQSTM1Q13501 440 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 EIF2B1Q14232 305 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 CDK5R1Q15078 307 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 LINC00303Q3SY05 128 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 FAM74A1Q5RGS3 127 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 C2CD4CQ8TF44 421 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 ARL5BQ96KC2 179 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 TGM7Q96PF1 710 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 SDHCQ99643 169 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 KCNJ16Q9NPI9 418 aa10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF629Q9UEG4 869 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-201ENST00000266546 PCM1Q15154 2024 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 IGHV1OR15-9A0A0B4J2B8 117 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 M0QYG6 137 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 TBX19O60806 448 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC29A4Q7RTT9 530 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 MCATQ8IVS2 390 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 ZFP82Q8N141 532 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 OR5H2Q8NGV7 314 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 PEX11GQ96HA9 241 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 LINC00052Q96N35 136 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 RNF32Q9H0A6 362 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 NIT2Q9NQR4 276 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 KIAA1671Q9BY89 1806 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 CALCBP10092 127 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 POU3F4P49335 361 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 LGALSLQ3ZCW2 172 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 CD300LDQ6UXZ3 194 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 LRRC69Q6ZNQ3 347 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 TMEM200AQ86VY9 491 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 OR52B4Q8NGK2 314 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 MR1Q95460 341 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 C1QTNF6Q9BXI9 259 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF175Q9Y473 711 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 CUL9Q8IWT3 2517 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 A0A1W2PR48 441 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms