RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 FAM46BQ96A09 425 aa15.24■□□□□ 0.03
SQLE-201ENST00000265896 PRTFDC1Q9NRG1 225 aa15.24■□□□□ 0.03
SQLE-201ENST00000265896 EPOPA6NHQ4 379 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 EIF1AYO14602 144 aaKnown RBP15.23■□□□□ 0.03
SQLE-201ENST00000265896 PNPP00491 289 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 IFNGR1P15260 489 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 TACR3P29371 465 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 SEC61A1P61619 476 aaKnown RBP15.23■□□□□ 0.03
SQLE-201ENST00000265896 NHLRC3Q5JS37 347 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 UNQ9370/PRO34162Q6UXP9 181 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 NUDT18Q6ZVK8 323 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 ST8SIA4Q92187 359 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 SLC25A28Q96A46 364 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 CCDC74AQ96AQ1 378 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 TSPAN32Q96QS1 320 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 MESP1Q9BRJ9 268 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 TINAGL1Q9GZM7 467 aaPredicted RBP15.23■□□□□ 0.03
SQLE-201ENST00000265896 ELOVL3Q9HB03 270 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 BAIAP2Q9UQB8 552 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 ACOT7O00154 380 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 PDCD5O14737 125 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 HCRTR2O43614 444 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 ALOX12BO75342 701 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 EIF1AXP47813 144 aaKnown RBP15.23■□□□□ 0.03
SQLE-201ENST00000265896 TPMTP51580 245 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 GPR143P51810 404 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 DLX2Q07687 328 aaPredicted RBP15.23■□□□□ 0.03
SQLE-201ENST00000265896 SPOCK1Q08629 439 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 SLC22A6Q4U2R8 563 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 WDR38Q5JTN6 314 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 ZNF626Q68DY1 528 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 ZNF550Q7Z398 422 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 MCATQ8IVS2 390 aaKnown RBP15.23■□□□□ 0.03
SQLE-201ENST00000265896 TAAR8Q969N4 342 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 MIB2Q96AX9 1013 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 CMBLQ96DG6 245 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 KLHL15Q96M94 604 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 ZCCHC4Q9H5U6 513 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 TAS2R5Q9NYW4 299 aa15.23■□□□□ 0.03
SQLE-201ENST00000265896 URB1O60287 2271 aaKnown RBP15.23■□□□□ 0.03
SQLE-201ENST00000265896 NDUFB6O95139 128 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 OPN1LWP04000 364 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 HOXD4P09016 255 aaPredicted RBP15.22■□□□□ 0.03
SQLE-201ENST00000265896 AP3S2P59780 193 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 C2orf76Q3KRA6 126 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 ARMC6Q6NXE6 501 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 LINC00114Q6XXX2 140 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 LRRTM1Q86UE6 522 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 OOSP2Q86WS3 158 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 GPR119Q8TDV5 335 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 NXF5Q9H1B4 397 aaKnown RBP15.22■□□□□ 0.03
SQLE-201ENST00000265896 SFXN1Q9H9B4 322 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 GDE1Q9NZC3 331 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 OPN4Q9UHM6 478 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 A0A0J9YY10 115 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 TNFSF14O43557 240 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 CDC40O60508 579 aaKnown RBP eCLIP15.22■□□□□ 0.032e-7■□□□□ 11
SQLE-201ENST00000265896 ECDO95905 644 aaPredicted RBP15.22■□□□□ 0.03
SQLE-201ENST00000265896 RAB38P57729 211 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 NKAIN2Q5VXU1 208 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 CMIPQ8IY22 773 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 TSLPQ969D9 159 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 OR11A1Q9GZK7 315 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 SOHLH2Q9NX45 425 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 B9D1Q9UPM9 204 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 NPTNQ9Y639 398 aa15.22■□□□□ 0.03
SQLE-201ENST00000265896 H0YIG0 161 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 GLSO94925 669 aaPredicted RBP15.21■□□□□ 0.03
SQLE-201ENST00000265896 CD14P08571 375 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 CTSEP14091 401 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 S100A11P31949 105 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 ZNF74Q16587 644 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 HACD4Q5VWC8 232 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 WBP1Q96G27 269 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 REG4Q9BYZ8 158 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 B3GNT4Q9C0J1 378 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 POFUT1Q9H488 388 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 ZC4H2Q9NQZ6 224 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 TCRBV21S2A2A0A5A6 115 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 UBE2QL1A1L167 161 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 C17orf105B2RV13 164 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 FOXS1O43638 330 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 CTAG2O75638 210 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 RP2O75695 350 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 HNRNPA2B1P22626 353 aaKnown RBP15.21■□□□□ 0.03
SQLE-201ENST00000265896 KIR3DL2P43630 455 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 MOGAT2Q3SYC2 334 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 GALNT16Q8N428 558 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 THAP3Q8WTV1 239 aaPredicted RBP15.21■□□□□ 0.03
SQLE-201ENST00000265896 FBXW5Q969U6 566 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 NMNAT2Q9BZQ4 307 aa15.21■□□□□ 0.03
SQLE-201ENST00000265896 GPN1Q9HCN4 374 aaPredicted RBP15.21■□□□□ 0.03
SQLE-201ENST00000265896 LOC101059948A0A1B0GTJ6 334 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 SLC22A23A1A5C7 686 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 OR4C45A6NMZ5 311 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 H3BUI4 141 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 GFERP55789 205 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 DEFA5Q01523 94 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 MFGE8Q08431 387 aaPredicted RBP15.21■□□□□ 0.02
SQLE-201ENST00000265896 CORO6Q6QEF8 472 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms