RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ALG11Q2TAA5 492 aa8□□□□□ -1.13
VAPB-201ENST00000265619 ACTBL2Q562R1 376 aa8□□□□□ -1.13
VAPB-201ENST00000265619 LIPJQ5W064 366 aa8□□□□□ -1.13
VAPB-201ENST00000265619 PRSS58Q8IYP2 241 aa8□□□□□ -1.13
VAPB-201ENST00000265619 MVB12AQ96EY5 273 aa8□□□□□ -1.13
VAPB-201ENST00000265619 PHYHIPLQ96FC7 376 aa8□□□□□ -1.13
VAPB-201ENST00000265619 PIK3IP1Q96FE7 263 aa8□□□□□ -1.13
VAPB-201ENST00000265619 SIRT3Q9NTG7 399 aaPredicted RBP8□□□□□ -1.13
VAPB-201ENST00000265619 H2AFY2Q9P0M6 372 aaPredicted RBP8□□□□□ -1.13
VAPB-201ENST00000265619 PPP4R1LQ9P1A2 415 aa8□□□□□ -1.13
VAPB-201ENST00000265619 TRAV1-2A0A0B4J238 106 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 TRBV5-4A0A0C4DH59 114 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 FAM221BA6H8Z2 402 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 IFITM5A6NNB3 132 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 RBBP9O75884 186 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 OR2F2O95006 317 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ILF3Q12906 894 aaKnown RBP eCLIP7.99□□□□□ -1.13
VAPB-201ENST00000265619 SGCGQ13326 291 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 OR2F1Q13607 317 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 NDUFA9Q16795 377 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 CERS6Q6ZMG9 384 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ACOT7LQ6ZUV0 252 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 RHOUQ7L0Q8 258 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ADCK2Q7Z695 626 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 OR10J5Q8NHC4 309 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 OTUB2Q96DC9 234 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 UBQLN3Q9H347 655 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 FAM86C1Q9NVL1 165 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ANAPC1Q9H1A4 1944 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 A0A1B0GTI1 187 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 GGT3PA6NGU5 568 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 M0QYG6 137 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ZNF197O14709 1029 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 IFNGP01579 166 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 PAX6P26367 422 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 CERS1P27544 350 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ZNF345Q14585 488 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 MPPED2Q15777 294 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 LILRA6Q6PI73 481 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ZNF620Q6ZNG0 422 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 MEPCEQ7L2J0 689 aaKnown RBP7.99□□□□□ -1.13
VAPB-201ENST00000265619 NXPE1Q8N323 547 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 KDF1Q8NAX2 398 aaPredicted RBP7.99□□□□□ -1.13
VAPB-201ENST00000265619 OR5K2Q8NHB8 316 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 OVCA2Q8WZ82 227 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 IRF7Q92985 503 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 SCAMP4Q969E2 229 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 NEURL3Q96EH8 262 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 PRRC1Q96M27 445 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 JSRP1Q96MG2 331 aaPredicted RBP7.99□□□□□ -1.13
VAPB-201ENST00000265619 LRRC3BQ96PB8 259 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 KLHL31Q9H511 634 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ADGRL4Q9HBW9 690 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 NCDNQ9UBB6 729 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 EPOPA6NHQ4 379 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 MARCH11A6NNE9 402 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 H0YIV9 168 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 BCAT2O15382 392 aaPredicted RBP7.99□□□□□ -1.13
VAPB-201ENST00000265619 MBP02144 154 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 SRMP19623 302 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 SERPINA4P29622 427 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 CDX1P47902 265 aaPredicted RBP7.99□□□□□ -1.13
VAPB-201ENST00000265619 METAP1P53582 386 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 CLDN2P57739 230 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 TAS2R41P59536 307 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 KIAA0141Q14154 515 aaPredicted RBP7.99□□□□□ -1.13
VAPB-201ENST00000265619 SLC9A5Q14940 896 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 AGERQ15109 404 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 NSUN5P2Q63ZY6 315 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 OR2A2Q6IF42 318 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 GRHL2Q6ISB3 625 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 THSD4Q6ZMP0 1018 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 FAM129CQ86XR2 697 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 VRK2Q86Y07 508 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 YAF2Q8IY57 180 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 RNF113BQ8IZP6 322 aaKnown RBP7.99□□□□□ -1.13
VAPB-201ENST00000265619 LRRC18Q8N456 261 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 OR5M8Q8NGP6 311 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 CLP1Q92989 425 aaKnown RBP7.99□□□□□ -1.13
VAPB-201ENST00000265619 PELI1Q96FA3 418 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ZFYVE1Q9HBF4 777 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 SPHK2Q9NRA0 654 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 DOK5Q9P104 306 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 LHX3Q9UBR4 397 aa7.99□□□□□ -1.13
VAPB-201ENST00000265619 ZNF726A6NNF4 738 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 TBX6O95947 436 aaPredicted RBP7.98□□□□□ -1.13
VAPB-201ENST00000265619 GTF2F2P13984 249 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 ADRA2CP18825 462 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 CAV2P51636 162 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 TNFRSF9Q07011 255 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 CDKN3Q16667 212 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 KHDC3LQ587J8 217 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 ZNF385CQ66K41 422 aaPredicted RBP7.98□□□□□ -1.13
VAPB-201ENST00000265619 OR6N1Q8NGY5 312 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 NUDCD2Q8WVJ2 157 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 ZNF559Q9BR84 538 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 KRCC1Q9NPI7 259 aaPredicted RBP7.98□□□□□ -1.13
VAPB-201ENST00000265619 GDE1Q9NZC3 331 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 CHRNA9Q9UGM1 479 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 TIMM10BQ9Y5J6 103 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms