RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ECDO95905 644 aaPredicted RBP10.04□□□□□ -0.8
MSH3-201ENST00000265081 SULT1A3P0DMM9 295 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 SULT1A4P0DMN0 295 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 FAM205BPQ63HN1 556 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 ZNF57Q68EA5 555 aaPredicted RBP10.04□□□□□ -0.8
MSH3-201ENST00000265081 ZNF679Q8IYX0 411 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 SAP25Q8TEE9 199 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 SLC25A28Q96A46 364 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 ADAD1Q96M93 576 aaKnown RBP10.04□□□□□ -0.8
MSH3-201ENST00000265081 KCNK17Q96T54 332 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 HDHD2Q9H0R4 259 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 SYT4Q9H2B2 425 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 ZFP64Q9NPA5 681 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 MCUBQ9NWR8 336 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 LAMP5Q9UJQ1 280 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 MKL2Q9ULH7 1088 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 A0A1B0GVT2 93 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 LOC390937A0A1W2PQ73 354 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 DOK2O60496 412 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 TGM6O95932 706 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 HRGP04196 525 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 IGFBP4P22692 258 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 APOBEC1P41238 236 aaKnown RBP10.04□□□□□ -0.8
MSH3-201ENST00000265081 FGD2Q7Z6J4 655 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 WDFY1Q8IWB7 410 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 UBE2J2Q8N2K1 259 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 TOMM5Q8N4H5 51 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 OR11H7Q8NGC8 314 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 STT3BQ8TCJ2 826 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 TTC9Q92623 222 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 DUSP23Q9BVJ7 150 aa10.04□□□□□ -0.8
MSH3-201ENST00000265081 MYO15AQ9UKN7 3530 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 OR2T1O43869 369 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 HIST1H2ABP04908 130 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 S100A1P23297 94 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 P2RY4P51582 365 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 ACY1Q03154 408 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 WDR38Q5JTN6 314 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 HIST3H2AQ7L7L0 130 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 LINGO2Q7L985 606 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 OR11G2Q8NGC1 345 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 HIST1H2ACQ93077 130 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 GPR137Q96N19 417 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 GAL3ST4Q96RP7 486 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 TBL1XR1Q9BZK7 514 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 TAS2R10Q9NYW0 307 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 BRWD1Q9NSI6 2320 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 KHNYNO15037 678 aaKnown RBP10.03□□□□□ -0.8
MSH3-201ENST00000265081 GDNFP39905 211 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 C9orf62Q8N4C0 152 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 LILRB4Q8NHJ6 448 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 POTEKPQ9BYX7 375 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 AUNIPQ9H7T9 357 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 PLSCR3Q9NRY6 295 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 ING3Q9NXR8 418 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 FAM171A2A8MVW0 826 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 H7C1C5 153 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 GRPRP30550 384 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 LCN6P62502 163 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 MAB21L1Q13394 359 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 MADCAM1Q13477 382 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 COL28A1Q2UY09 1125 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 HLA-DQA1Q5Y7H0 255 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 MRPL14Q6P1L8 145 aaKnown RBP10.03□□□□□ -0.8
MSH3-201ENST00000265081 BIVMQ86UB2 503 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 CEP76Q8TAP6 659 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 HLA-CQ95604 372 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 MED30Q96HR3 178 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 PRMT8Q9NR22 394 aaPredicted RBP10.03□□□□□ -0.8
MSH3-201ENST00000265081 PAQR5Q9NXK6 330 aaPredicted RBP10.03□□□□□ -0.8
MSH3-201ENST00000265081 AKAP7Q9P0M2 348 aaPredicted RBP10.03□□□□□ -0.8
MSH3-201ENST00000265081 STEAP1Q9UHE8 339 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 KCNG2Q9UJ96 466 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 HRH3Q9Y5N1 445 aa10.03□□□□□ -0.8
MSH3-201ENST00000265081 A0A1W2PPK0 400 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 A0A1W2PQM1 296 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 CDC14CA4D256 554 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 G3V3Q6 166 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 LDLRAD4O15165 306 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 GLSO94925 669 aaPredicted RBP10.02□□□□□ -0.8
MSH3-201ENST00000265081 TIAF1O95411 115 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 TCEA1P23193 301 aaKnown RBP10.02□□□□□ -0.8
MSH3-201ENST00000265081 CCR4P51679 360 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 RPS15P62841 145 aaKnown RBP10.02□□□□□ -0.8
MSH3-201ENST00000265081 CD83Q01151 205 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 C17orf67Q0P5P2 114 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 MFSD13AQ14CX5 517 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 DPY19L4Q7Z388 723 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 OR56B4Q8NH76 319 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 ST7LQ8TDW4 575 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 UBASH3BQ8TF42 649 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 DMRTB1Q96MA1 342 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 HRASLSQ9HDD0 168 aa10.02□□□□□ -0.8
MSH3-201ENST00000265081 RYDENQ9NUL5 291 aaKnown RBP10.02□□□□□ -0.8
MSH3-201ENST00000265081 MEIKINA0A087WXM9 373 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 LOC102723996A0A087X1L8 192 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 IGHV5-10-1A0A0J9YXX1 117 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 A0A1W2PQ72 361 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms