RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MIB2Q96AX9 1013 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 CCDC86Q9H6F5 360 aaKnown RBP12.82□□□□□ -0.36
CDH3-201ENST00000264012 LIN7BQ9HAP6 207 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 PRDM7Q9NQW5 492 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 ACOXLQ9NUZ1 547 aa12.82□□□□□ -0.36
CDH3-201ENST00000264012 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.82□□□□□ -0.36
CDH3-201ENST00000264012 ARRDC5A6NEK1 342 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 LILRA5A6NI73 299 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 ABHD16AO95870 558 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 CLDN6P56747 220 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 PRSS36Q5K4E3 855 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 GLYATL3Q5SZD4 288 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 C6orf15Q6UXA7 325 aaPredicted RBP12.81□□□□□ -0.36
CDH3-201ENST00000264012 LILRB2Q8N423 598 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 SIRT6Q8N6T7 355 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 TMEM178AQ8NBL3 297 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 SELENOIQ9C0D9 397 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 RNF167Q9H6Y7 350 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 KIAA1217Q5T5P2 1943 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 OR6C76A6NM76 312 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 KLRC4-KLRK1H3BQV0 150 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 TAS2R46P59540 309 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 MZT1Q08AG7 82 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 NKG7Q16617 165 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 PSMF1Q92530 271 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 SLC38A1Q9H2H9 487 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 NRG2O14511 850 aaPredicted RBP12.81□□□□□ -0.36
CDH3-201ENST00000264012 DPM1O60762 260 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 SPI1P17947 270 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 TNFSF4P23510 183 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 ACKR1Q16570 336 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 GPR157Q5UAW9 335 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 IDO2Q6ZQW0 420 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 PLPP7Q8NBV4 271 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 OR4K15Q8NH41 348 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 FAM3DQ96BQ1 224 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 OR11A1Q9GZK7 315 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 RAB9BQ9NP90 201 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 ETV7Q9Y603 341 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 TMEM82A0PJX8 343 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 OR2W5A6NFC9 320 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 SSX5O60225 188 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 IFNA1P01562 189 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 SDHAP31040 664 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 GK2Q14410 553 aaPredicted RBP12.81□□□□□ -0.36
CDH3-201ENST00000264012 KMT5CQ86Y97 462 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 GJC3Q8NFK1 279 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 ZFAND1Q8TCF1 268 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 MUCL1Q96DR8 90 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 C11orf54Q9H0W9 315 aaPredicted RBP12.81□□□□□ -0.36
CDH3-201ENST00000264012 NTN4Q9HB63 628 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 ZNF286AQ9HBT8 521 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 STEAP1Q9UHE8 339 aa12.81□□□□□ -0.36
CDH3-201ENST00000264012 KCNE1BA0A087WTH5 132 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 TK1P04183 234 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 FKBP2P26885 142 aaKnown RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 ZNF93P35789 620 aaPredicted RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 HSF1Q00613 529 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 CPEB2Q7Z5Q1 589 aaKnown RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 OR6V1Q8N148 313 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 OR6M1Q8NGM8 313 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 GCDHQ92947 438 aaPredicted RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 THOC3Q96J01 351 aaKnown RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 RANGRFQ9HD47 186 aaPredicted RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 CHST11Q9NPF2 352 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 B3GNT2Q9NY97 397 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 ZNF587BE7ETH6 402 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 BLVRBP30043 206 aaPredicted RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 RAE1P78406 368 aaKnown RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 PBDC1Q9BVG4 233 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 SLC25A19Q9HC21 320 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 SLAMF7Q9NQ25 335 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 GPR55Q9Y2T6 319 aaPredicted RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 MED16Q9Y2X0 877 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 GPX5O75715 221 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 ITGB2P05107 769 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 SLC2A1P11166 492 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 EVI2BP34910 448 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 DIO1P49895 249 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 HTR4Q13639 388 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 RBM39Q14498 530 aaKnown RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 PRTGQ2VWP7 1150 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 MSRB3Q8IXL7 192 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 ETFBKMTQ8IXQ9 262 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 ADGRF3Q8IZF5 1079 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 ARIH2OSQ8N7S6 290 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 SLC25A46Q96AG3 418 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 PPA2Q9H2U2 334 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 ZNF814B7Z6K7 855 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 ATP1B1P05026 303 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 HOXB5P09067 269 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 HCCSP53701 268 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 RAP2BP61225 183 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 AKR1C8PQ5T2L2 129 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 SIAH3Q8IW03 269 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 FKRPQ9H9S5 495 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 ZNF223Q9UK11 482 aaPredicted RBP12.8□□□□□ -0.36
CDH3-201ENST00000264012 UGT2A1Q9Y4X1 527 aa12.8□□□□□ -0.36
CDH3-201ENST00000264012 DRD3P35462 400 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 GPR85P60893 370 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms