RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 FAIMQ9NVQ4 179 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 WIF1Q9Y5W5 379 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 METTL15A6NJ78 407 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 SH2D7A6NKC9 451 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 C21orf140B9A014 251 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 B4GAT1O43505 415 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 PTAFRP25105 342 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 GABRA4P48169 554 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 CTXN1P60606 82 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 RRAS2P62070 204 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 NKAIN2Q5VXU1 208 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 CHPT1Q8WUD6 406 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 PATE1Q8WXA2 126 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 INTS14Q96SY0 518 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 ALG8Q9BVK2 526 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 GPR87Q9BY21 358 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 RLIMQ9NVW2 624 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 A0A1W2PQ09 198 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 NKX6-3A6NJ46 265 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 IFNA1P01562 189 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 MAS1P04201 325 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 ATXN7L3Q14CW9 347 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 CTU2Q2VPK5 515 aaKnown RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 XAF1Q6GPH4 301 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 TMEM81Q6P7N7 255 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 SLC22A18ASQ8N1D0 253 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 SCCPDHQ8NBX0 429 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 OR2Y1Q8NGV0 311 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 SEMA4GQ9NTN9 838 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 TRPM6Q9BX84 2022 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 CACNA1HO95180 2353 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 MAP1BP46821 2468 aaKnown RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 ANKUB1A6NFN9 424 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 CDRT1O95170 752 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 ETV5P41161 510 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 LSSP48449 732 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 PSMA6P60900 246 aaKnown RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 ARL16Q0P5N6 197 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 PLEKHN1Q494U1 663 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 C1orf140Q5VVS0 124 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 SLC23A3Q6PIS1 610 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 Q6ZNX1 250 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 FAM46BQ96A09 425 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 SPACA9Q96E40 222 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 FAM71F1Q96KD3 344 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 TEAD3Q99594 435 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF649Q9BS31 505 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 MMP25Q9NPA2 562 aa7.51□□□□□ -1.21
PTPN3-201ENST00000262539 EXOGQ9Y2C4 368 aaKnown RBP7.51□□□□□ -1.21
PTPN3-201ENST00000262539 KLF4O43474 513 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 SLC2A1P11166 492 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 C21orf33P30042 268 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-201ENST00000262539 SDHAP31040 664 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 CSNK1A1P48729 337 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 OR52E2Q8NGJ4 325 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 FAM234AQ9H0X4 552 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 SLCO5A1Q9H2Y9 848 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 RANBP3Q9H6Z4 567 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-201ENST00000262539 NOTOA8MTQ0 251 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 D6RAR5 112 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 IL9P15248 144 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 CD1EP15812 388 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 MSR1P21757 451 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TACR3P29371 465 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 C1QTNF12Q5T7M4 302 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 EIF5AL1Q6IS14 154 aaKnown RBP7.5□□□□□ -1.21
PTPN3-201ENST00000262539 LRRC28Q86X40 367 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-201ENST00000262539 C1orf210Q8IVY1 113 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 LRRC18Q8N456 261 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 SAP25Q8TEE9 199 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 FAM60AQ9NP50 221 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 MLXQ9UH92 298 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 RASD1Q9Y272 281 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 SYT7O43581 403 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 SSTR4P31391 388 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 RAD52P43351 418 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 GPR4P46093 362 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 RAB31Q13636 194 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 BCL2A1Q16548 175 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 RTL6Q6ICC9 239 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 FRMD1Q8N878 549 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TXNIPQ9H3M7 391 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 HHLA2Q9UM44 414 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 CABIN1Q9Y6J0 2220 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TMED7-TICAM2A0A0A6YYA0 188 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 LOC102725191A0A1B0GVB3 256 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 A0A1W2PPH5 198 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 ACOD1A6NK06 481 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TMEM212A6NML5 194 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 LRRN3E7EW58 273 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 PRAF2O60831 178 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 GKN3PP0CG01 181 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 SOX3P41225 446 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 SLC37A1P57057 533 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 PLBD1Q6P4A8 553 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 MOB3CQ70IA8 216 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 OR1J4Q8NGS1 313 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 POM121Q96HA1 1249 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 BOD1Q96IK1 185 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TAAR9Q96RI9 348 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms