RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 DUX4L3P0CJ86 424 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 DUX4L4P0CJ87 422 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 DUX4L5P0CJ88 424 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 DUX4L6P0CJ89 424 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 DUX4L7P0CJ90 424 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 CD1CP29017 333 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 FGL1Q08830 312 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 ISXQ2M1V0 245 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 ZNF671Q8TAW3 534 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 ZNF524Q96C55 264 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 HSPA12BQ96MM6 686 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 GPX7Q96SL4 187 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-201ENST00000261963 DUX4Q9UBX2 424 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 SNRPGP15A8MWD9 76 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 C17orf105B2RV13 164 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 FLRT2O43155 660 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 COL19A1Q14993 1142 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 UBE2NLQ5JXB2 153 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 RPL22L1Q6P5R6 122 aaKnown RBP20.51■□□□□ 0.87
MCF2L-201ENST00000261963 CBLN3Q6UW01 205 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 ATG4DQ86TL0 474 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-201ENST00000261963 ZNF440Q8IYI8 595 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 PTPMT1Q8WUK0 201 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-201ENST00000261963 THEM6Q8WUY1 208 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 OR14A2Q96R54 314 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 PDCD1LG2Q9BQ51 273 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 NKX6-2Q9C056 277 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-201ENST00000261963 EXOSC3Q9NQT5 275 aaKnown RBP20.51■□□□□ 0.87
MCF2L-201ENST00000261963 LANCL2Q9NS86 450 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 SLC39A1Q9NY26 324 aa20.51■□□□□ 0.87
MCF2L-201ENST00000261963 ANXA7P20073 488 aaKnown RBP20.5■□□□□ 0.87
MCF2L-201ENST00000261963 MST1P26927 711 aa20.5■□□□□ 0.87
MCF2L-201ENST00000261963 GALNSP34059 522 aa20.5■□□□□ 0.87
MCF2L-201ENST00000261963 PSMB10P40306 273 aa20.5■□□□□ 0.87
MCF2L-201ENST00000261963 SKP2Q13309 424 aa20.5■□□□□ 0.87
MCF2L-201ENST00000261963 SLC35D3Q5M8T2 416 aa20.5■□□□□ 0.87
MCF2L-201ENST00000261963 LINC01590Q5TEZ4 76 aa20.5■□□□□ 0.87
MCF2L-201ENST00000261963 ZNF660Q6AZW8 331 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-201ENST00000261963 OR6K6Q8NGW6 343 aa20.5■□□□□ 0.87
MCF2L-201ENST00000261963 PNPLA2Q96AD5 504 aa20.5■□□□□ 0.87
MCF2L-201ENST00000261963 FXYD6-FXYD2A0A087WZ82 144 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 TRBV2A0A0J9YWF9 115 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 A0A1W2PR77 199 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 FITM1A5D6W6 292 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 PRR32B1ATL7 298 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 KHDRBS3O75525 346 aaKnown RBP20.49■□□□□ 0.87
MCF2L-201ENST00000261963 IL5P05113 134 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 AQP2P41181 271 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 PRPS1P60891 318 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 SERTAD2Q14140 314 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 WBP2NLQ6ICG8 309 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 CMTM4Q8IZR5 234 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 OR52I2Q8NH67 350 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 KLHDC3Q9BQ90 382 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 FXYD6Q9H0Q3 95 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 FANCFQ9NPI8 374 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 NDRG3Q9UGV2 375 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 KCNK7Q9Y2U2 307 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 SLC6A5Q9Y345 797 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 ELOA3DA6NLF2 546 aaPredicted RBP20.49■□□□□ 0.87
MCF2L-201ENST00000261963 PRSS44E7EML9 344 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 H0YIG0 161 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 AQP8O94778 261 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 CD1AP06126 327 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 EDNRAP25101 427 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 ADH7P40394 386 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 CDKN2AP42771 156 aaKnown RBP20.49■□□□□ 0.87
MCF2L-201ENST00000261963 SLC37A1P57057 533 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 ELOA3BQ3SY89 546 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 LINC00469Q8N7U9 141 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 PXT1Q8NFP0 134 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 TSTD1Q8NFU3 115 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 ELOA3Q8NG57 546 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 LGALS14Q8TCE9 139 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 Q96M85 177 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 MOGAT1Q96PD6 335 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 UBQLN4Q9NRR5 601 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 KLHL9Q9P2J3 617 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 MLXQ9UH92 298 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 PCDHGA9Q9Y5G4 932 aaKnown RBP20.49■□□□□ 0.87
MCF2L-201ENST00000261963 THADAQ6YHU6 1953 aa20.49■□□□□ 0.87
MCF2L-201ENST00000261963 IDSB3KWA1 339 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 GABARAPH6UMI1 98 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 SIGLEC5O15389 551 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 ARL6IP5O75915 188 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 SIGLEC14Q08ET2 396 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 ZNF74Q16587 644 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 C17orf82Q86X59 251 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-201ENST00000261963 GKN2Q86XP6 184 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 LRRC75AQ8NAA5 344 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 OR8K3Q8NH51 312 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 FAM174AQ8TBP5 190 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 GCDHQ92947 438 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-201ENST00000261963 RNF166Q96A37 237 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-201ENST00000261963 DNTTIP1Q9H147 329 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 NXF5Q9H1B4 397 aaKnown RBP20.48■□□□□ 0.87
MCF2L-201ENST00000261963 PDE7BQ9NP56 450 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 TLCD2A6NGC4 264 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 FAM171A2A8MVW0 826 aa20.48■□□□□ 0.87
MCF2L-201ENST00000261963 F8W036 122 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms