RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 OR2T27Q8NH04 317 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 NPAS1Q99742 590 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 CCDC3Q9BQI4 270 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 AIFM2Q9BRQ8 373 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 PLA2G2FQ9BZM2 168 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 SLC39A1Q9NY26 324 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 LOC101059948A0A1B0GTJ6 334 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 TMEM200CA6NKL6 621 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 SERPINA3P01011 423 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 GLAP06280 429 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 EPHA4P54764 986 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 UBE2IP63279 158 aaKnown RBP11.79□□□□□ -0.52
SNX1-201ENST00000261889 CD226Q15762 336 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 TMEM52BQ4KMG9 183 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 PRAMEF17Q5VTA0 474 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 ZNF425Q6IV72 752 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 JAZF1Q86VZ6 243 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 JAGN1Q8N5M9 183 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 PHOSPHO1Q8TCT1 267 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 GAL3ST3Q96A11 431 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
SNX1-201ENST00000261889 SLITRK2Q9H156 845 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 GPN1Q9HCN4 374 aaPredicted RBP11.79□□□□□ -0.52
SNX1-201ENST00000261889 LAMP5Q9UJQ1 280 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 C19orf53Q9UNZ5 99 aaPredicted RBP11.79□□□□□ -0.52
SNX1-201ENST00000261889 TRAV1-2A0A0B4J238 106 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 BRINP1O60477 761 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 GJA4P35212 333 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 DIO1P49895 249 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 ETV3LQ6ZN32 361 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 OR6V1Q8N148 313 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 BEST3Q8N1M1 668 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 AVL9Q8NBF6 648 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 CMKLR1Q99788 373 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 NPTNQ9Y639 398 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 GIPP09681 153 aaPredicted RBP11.79□□□□□ -0.52
SNX1-201ENST00000261889 CAPZA1P52907 286 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 ATP1B3P54709 279 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 RAP2BP61225 183 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 SKP1P63208 163 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 ACTC1P68032 377 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 ACTA1P68133 377 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 PRICKLE4Q2TBC4 344 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 HDDC2Q7Z4H3 204 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 SDR16C5Q8N3Y7 309 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 SCARB1Q8WTV0 552 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 KTI12Q96EK9 354 aaPredicted RBP11.79□□□□□ -0.52
SNX1-201ENST00000261889 ZNF416Q9BWM5 594 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 TEX101Q9BY14 249 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 OR2S2Q9NQN1 319 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 HPF1Q9NWY4 346 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 MED11Q9P086 117 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 FAM96BQ9Y3D0 163 aa11.79□□□□□ -0.52
SNX1-201ENST00000261889 PHF3Q92576 2039 aaKnown RBP11.78□□□□□ -0.52
SNX1-201ENST00000261889 ACOT7O00154 380 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 SPARCP09486 303 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 TGIF1Q15583 401 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 TOMM34Q15785 309 aaPredicted RBP11.78□□□□□ -0.52
SNX1-201ENST00000261889 C3orf33Q6P1S2 294 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 CORO6Q6QEF8 472 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 RNF144BQ7Z419 303 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 TMEM151BQ8IW70 566 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 STEAP2Q8NFT2 490 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 OR1S2Q8NGQ3 325 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 PAQR8Q8TEZ7 354 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 MOAP1Q96BY2 351 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 HAVCR1Q96D42 359 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 GAL3ST4Q96RP7 486 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 MYADMQ96S97 322 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 APOOQ9BUR5 198 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 MKKSQ9NPJ1 570 aaPredicted RBP11.78□□□□□ -0.52
SNX1-201ENST00000261889 ENTPD2Q9Y5L3 495 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 SLC22A7Q9Y694 548 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 TRAV14DV4A0A0A6YYC5 116 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 MED19A0JLT2 244 aaPredicted RBP11.78□□□□□ -0.52
SNX1-201ENST00000261889 PRSS38A1L453 326 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 CPED1A4D0V7 1026 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 OR6C76A6NM76 312 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 H0YIG0 161 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 DNASE2O00115 360 aaPredicted RBP11.78□□□□□ -0.52
SNX1-201ENST00000261889 ITGA10O75578 1167 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 PNPP00491 289 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 RD3LP0DJH9 198 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 AKR1C4P17516 323 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 DLX5P56178 289 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 C2orf76Q3KRA6 126 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 NKAIN2Q5VXU1 208 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 NPSR1Q6W5P4 371 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 ZNF765Q7L2R6 523 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 FAM220AQ7Z4H9 259 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 CDRT4Q8N9R6 151 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 RERGQ96A58 199 aaPredicted RBP11.78□□□□□ -0.52
SNX1-201ENST00000261889 RTN4RQ9BZR6 473 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 B9D1Q9UPM9 204 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 D6RAR5 112 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 FADS1O60427 444 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 SLC25A12O75746 678 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 IL32P24001 234 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 NFYBP25208 207 aa11.78□□□□□ -0.52
SNX1-201ENST00000261889 HSD17B2P37059 387 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms