RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MED29Q9NX70 200 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 TUBA8Q9NY65 449 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 MED11Q9P086 117 aa4.93□□□□□ -1.62
TOPBP1-201ENST00000260810 A0A1B0GVC2 190 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 A0A1W2PP11 408 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 TMEM129A0AVI4 362 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 EFCAB10A6NFE3 127 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 PDPK1O15530 556 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 B3GALT2O43825 422 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 CYP7B1O75881 506 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 APOC1P02654 83 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 LPLP06858 475 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 GABRA3P34903 492 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 WNT5AP41221 380 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 KIR2DL2P43627 348 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 DNASE1L1P49184 302 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 RASGEF1BQ0VAM2 473 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 UNC119Q13432 240 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 LSAMPQ13449 338 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 ELAVL1Q15717 326 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 INAQ16352 499 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 PRAMEF8Q5VWM4 474 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 PRAMEF7Q5VXH5 474 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 C20orf204Q6ZNR8 217 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 CYB561A3Q8NBI2 242 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 SPPL2AQ8TCT8 520 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MAGEE2Q8TD90 523 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 PRRC1Q96M27 445 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 TRPC4Q9UBN4 977 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 C3orf18Q9UK00 162 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 PLCL2Q9UPR0 1127 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 A0A1W2PPW3 197 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 A8MUA0 341 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 KPNA4O00629 521 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 CCNB2O95067 398 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 DBHP09172 617 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 DHPSP49366 369 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 SNRPGP62308 76 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 RPL18Q07020 188 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MRPL49Q13405 166 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 SMCO1Q147U7 214 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 TRIP6Q15654 476 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 LIN54Q6MZP7 749 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 GALNT4Q8N4A0 578 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 NANOGP1Q8N7R0 232 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 GCDHQ92947 438 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MVB12AQ96EY5 273 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 DCBLD2Q96PD2 775 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 DDA1Q9BW61 102 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 ANKHQ9HCJ1 492 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MED17Q9NVC6 651 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 PLA2G2EQ9NZK7 142 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 B4GALT7Q9UBV7 327 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 OR10H1Q9Y4A9 318 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 A0A1W2PNR3 127 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 OR2M5A3KFT3 312 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 LAMTOR5O43504 91 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 HCRTR2O43614 444 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 CHP2O43745 196 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 TNFAIP8O95379 198 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 CCDC159P0C7I6 412 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 CCNYL3P0C7X3 344 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF182P17025 639 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 GSTM3P21266 225 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 PAX7P23759 505 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MAP2K6P52564 334 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MELKQ14680 651 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 ELOCQ15369 112 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 C2orf68Q2NKX9 166 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MOGAT2Q3SYC2 334 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 CCDC157Q569K6 752 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 NXNL2Q5VZ03 156 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 TRIQKQ629K1 86 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 BORAQ6PGQ7 559 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 FAM214BQ7L5A3 538 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 CPEB2Q7Z5Q1 589 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 SULF2Q8IWU5 870 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 OR4K14Q8NGD5 310 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 OR51L1Q8NGJ5 315 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 OR51A2Q8NGJ7 313 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 FCGR1BQ92637 280 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 ARHGAP9Q9BRR9 750 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 NEUROD4Q9HD90 331 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 A0A087WXM4 84 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 A0A1W2PQL4 384 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 FAM221AA4D161 298 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 EFCAB7A8K855 629 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 EMC8O43402 210 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 ZFPL1O95159 310 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 IFNA16P05015 189 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MNDAP41218 407 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MAGEA8P43361 318 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 KEAP1Q14145 624 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 ELOAQ14241 798 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 IL11RAQ14626 422 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 BAK1Q16611 211 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 SNAI3Q3KNW1 292 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 OTUD3Q5T2D3 398 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 BROXQ5VW32 411 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 RPL13AP3Q6NVV1 102 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms