RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 H3BML4 177 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 NXPH3O95157 252 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 PAPLNO95428 1278 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 ERCC1P07992 297 aaPredicted RBP13.62□□□□□ -0.23
KCTD3-201ENST00000259154 TMIGD3P0DMS9 266 aaPredicted RBP13.62□□□□□ -0.23
KCTD3-201ENST00000259154 MYOGP15173 224 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 CXCL2P19875 107 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 P2RX1P51575 399 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 RIDAP52758 137 aaKnown RBP13.62□□□□□ -0.23
KCTD3-201ENST00000259154 MEX3BQ6ZN04 569 aaKnown RBP13.62□□□□□ -0.23
KCTD3-201ENST00000259154 SSX9Q7RTT3 188 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 BATF2Q8N1L9 274 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 ELP5Q8TE02 316 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 SUSD5O60279 629 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 CSNK1G2P78368 415 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 CDKN3Q16667 212 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 AKR1C8PQ5T2L2 129 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 GPR157Q5UAW9 335 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 RNLSQ5VYX0 342 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 GLRX5Q86SX6 157 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 TRAPPC6BQ86SZ2 158 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 ETFBKMTQ8IXQ9 262 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 TOX2Q96NM4 488 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 SLX1AQ9BQ83 275 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 SPHK1Q9NYA1 384 aa13.62□□□□□ -0.23
KCTD3-201ENST00000259154 LINC00862A6NCI5 91 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 NME2P1O60361 137 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 CTRB1P17538 263 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 LBX1P52954 281 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 MEP1BQ16820 701 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 CHRFAM7AQ494W8 412 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 MANEAQ5SRI9 462 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 HENMT1Q5T8I9 393 aaKnown RBP13.61□□□□□ -0.23
KCTD3-201ENST00000259154 CTRB2Q6GPI1 263 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 RPL13AP3Q6NVV1 102 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 TSEN54Q7Z6J9 526 aaKnown RBP13.61□□□□□ -0.23
KCTD3-201ENST00000259154 CSNK1A1LQ8N752 337 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 SEMA6DQ8NFY4 1073 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 OR1J2Q8NGS2 313 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 VOPP1Q96AW1 172 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 FAM3DQ96BQ1 224 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 SORCS2Q96PQ0 1159 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 ADOQ96SZ5 270 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 NUDT22Q9BRQ3 303 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 MED18Q9BUE0 208 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 SLC6A17Q9H1V8 727 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 CSAG2Q9Y5P2 127 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 SDK2Q58EX2 2172 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 TRIM77I1YAP6 450 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 SDCBPO00560 298 aaPredicted RBP13.61□□□□□ -0.23
KCTD3-201ENST00000259154 SHOXO15266 292 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 RAB40ALP0C0E4 278 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 VAMP2P63027 116 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 KCTD18Q6PI47 426 aaPredicted RBP13.61□□□□□ -0.23
KCTD3-201ENST00000259154 RAB40AQ8WXH6 277 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 MYADMQ96S97 322 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 NPAS1Q99742 590 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 CHST6Q9GZX3 395 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 ZFP64Q9NPA5 681 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 ZNF230Q9UIE0 474 aaPredicted RBP13.61□□□□□ -0.23
KCTD3-201ENST00000259154 ANAPC1Q9H1A4 1944 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 SLC22A23A1A5C7 686 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 AIPO00170 330 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 CRTAPO75718 401 aaPredicted RBP13.61□□□□□ -0.23
KCTD3-201ENST00000259154 MAT1AQ00266 395 aaKnown RBP13.61□□□□□ -0.23
KCTD3-201ENST00000259154 FRMD1Q8N878 549 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 ZNF417Q8TAU3 575 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 SMARCD2Q92925 531 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 ZDHHC5Q9C0B5 715 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 C12orf10Q9HB07 376 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 CFAP54Q96N23 3096 aa13.61□□□□□ -0.23
KCTD3-201ENST00000259154 TRBV5-4A0A0C4DH59 114 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 NPIPA5E9PKD4 350 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 OR2T7P0C7T2 308 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 ZNF16P17020 682 aaPredicted RBP13.6□□□□□ -0.23
KCTD3-201ENST00000259154 TAS2R19P59542 299 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 CDK5Q00535 292 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 ZNF273Q14593 569 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 ETFDHQ16134 617 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 DECR1Q16698 335 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 Q499Y3 187 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 PLA1AQ53H76 456 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 OR2T27Q8NH04 317 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 OR5K2Q8NHB8 316 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 FBLIM1Q8WUP2 373 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 HSD17B8Q92506 261 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 ZNF707Q96C28 371 aaPredicted RBP13.6□□□□□ -0.23
KCTD3-201ENST00000259154 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 POLE3Q9NRF9 147 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 NPIPA1Q9UND3 350 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 ICE1Q9Y2F5 2266 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 ZNF850A8MQ14 1090 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 CSTBP04080 98 aaKnown RBP13.6□□□□□ -0.23
KCTD3-201ENST00000259154 HOXB2P14652 356 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 HMGA2P52926 109 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 C21orf62-AS1Q17RA5 79 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 OR52W1Q6IF63 320 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 ZNF550Q7Z398 422 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 VN1R2Q8NFZ6 395 aa13.6□□□□□ -0.23
KCTD3-201ENST00000259154 PELI1Q96FA3 418 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms