RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 ELOVL3Q9HB03 270 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 CTSFQ9UBX1 484 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 SIGLEC7Q9Y286 467 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 SCN4AP35499 1836 aa11.28□□□□□ -0.6
USP30-201ENST00000257548 TEX13DA0A0J9YY54 714 aaPredicted RBP11.27□□□□□ -0.6
USP30-201ENST00000257548 GIMD1P0DJR0 217 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 NPBWR1P48145 328 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 EFNB2P52799 333 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 NCMAPQ5T1S8 102 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 HTR3DQ70Z44 454 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 ASPGQ86U10 573 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 LINC00469Q8N7U9 141 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 ZNF417Q8TAU3 575 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 RXFP4Q8TDU9 374 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 MS4A6EQ96DS6 147 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 AKR1E2Q96JD6 320 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 SPACA5Q96QH8 159 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 GREB1Q4ZG55 1949 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 ZNF236Q9UL36 1845 aa11.27□□□□□ -0.6
USP30-201ENST00000257548 SPTBN5Q9NRC6 3674 aaKnown RBP11.27□□□□□ -0.61
USP30-201ENST00000257548 ANKRD20A5PA0PJZ0 165 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 EPPINO95925 133 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 HOXC8P31273 242 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 HSD17B2P37059 387 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 SEC13P55735 322 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 DHRS2Q13268 280 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 ELAVL1Q15717 326 aaKnown RBP11.27□□□□□ -0.61
USP30-201ENST00000257548 C2orf76Q3KRA6 126 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 ALG10Q5BKT4 473 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 ZNF547Q8IVP9 402 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 SPICQ8N5J4 248 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 ZNF565Q8N9K5 539 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 OR51A4Q8NGJ6 313 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 NPRL2Q8WTW4 380 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 NUDCD2Q8WVJ2 157 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 FAM83CQ9BQN1 747 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 EPHA6Q9UF33 1036 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 ACAD8Q9UKU7 415 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 ZSWIM8A7E2V4 1837 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 KNTC1P50748 2209 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 CCDC163A0A0D9SF12 145 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 RFPL4AA6NLU0 287 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 A8MXK9 166 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 GPR89AB7ZAQ6 455 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 RFPL4AL1F8VTS6 287 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 JMJD7P0C870 316 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 GPR89BP0CG08 455 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 ACRP10323 421 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 ZNF823P16415 610 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 SPI1P17947 270 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 FUT5Q11128 374 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 TCTN1Q2MV58 587 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 C2orf27AQ580R0 203 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 TCEAL5Q5H9L2 206 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 ACOT7LQ6ZUV0 252 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 COX15Q7KZN9 410 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 SSX9Q7RTT3 188 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 SEMA6DQ8NFY4 1073 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 MIB2Q96AX9 1013 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 AHCYL2Q96HN2 611 aaKnown RBP11.27□□□□□ -0.61
USP30-201ENST00000257548 HHIPL1Q96JK4 782 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 HHIPQ96QV1 700 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 BCL2L14Q9BZR8 327 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 PELI2Q9HAT8 420 aa11.27□□□□□ -0.61
USP30-201ENST00000257548 TRAV1-2A0A0B4J238 106 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 A0A1W2PP55 124 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 EFCAB7A8K855 629 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 PMS2P2O95744 297 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 RNH1P13489 461 aaKnown RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 NPY4RP50391 375 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 NDUFA6P56556 154 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 WDR88Q6ZMY6 472 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 NAXDQ8IW45 347 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 DND1Q8IYX4 353 aaKnown RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 ST6GALNAC5Q9BVH7 336 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 MRPS18AQ9NVS2 196 aaKnown RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 MSRAQ9UJ68 235 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 ZNF223Q9UK11 482 aaPredicted RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 CABIN1Q9Y6J0 2220 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 SRPX2O60687 465 aaPredicted RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 SNAPC5O75971 98 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 PMP2P02689 132 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 CXCR1P25024 350 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 NDUFS1P28331 727 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 HTRA4P83105 476 aaPredicted RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 MAT1AQ00266 395 aaKnown RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 CHAF1BQ13112 559 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 ALKBH1Q13686 389 aaKnown RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 MEP1BQ16820 701 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 DEFB115Q30KQ5 88 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 SLC25A30Q5SVS4 291 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 ERN2Q76MJ5 926 aaKnown RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 YAF2Q8IY57 180 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 KDM8Q8N371 416 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 FAM174AQ8TBP5 190 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 RGP1Q92546 391 aaPredicted RBP11.26□□□□□ -0.61
USP30-201ENST00000257548 PPP1R14AQ96A00 147 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 SLAMF9Q96A28 289 aa11.26□□□□□ -0.61
USP30-201ENST00000257548 CMBLQ96DG6 245 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms